ggKbase home page

BD02T64_scaffold_540

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_540_1
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1307)
DNA (1305bp) protein (435aa)
NADH dehydrogenase (quinone) nuoL-like protein (EC:1.6.99.5)
Putative oxidoreductase n=1 Tax=Moritella sp. PE36 RepID=A6FCP1_9GAMM
Monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:KIC09246.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="
BD02T64_scaffold_540_2
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1313..1615)
DNA (303bp) protein (101aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
nuoK-2; NADH dehydrogenase (quinone) subunit K 2 (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit K n=1 Tax=Moritella sp. PE36 RepID=A6FCP2_9GAMM
BD02T64_scaffold_540_3
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1612..2175)
DNA (564bp) protein (188aa)
Putative oxidoreductase n=1 Tax=Moritella sp. PE36 RepID=A6FCP3_9GAMM rbh
NADH-ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:KIC09244.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="L
nuoj3; NADH-ubiquinone/plastoquinone oxidoreductase,chain 6
BD02T64_scaffold_540_4
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2236..2550)
DNA (315bp) protein (105aa)
Putative signal-transduction protein containing cAMP-binding and CBS domain-containing protein n=1 Tax=Rhizobium sp. CF122 RepID=J2RLL6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KIC09243.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
BD02T64_scaffold_540_5
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2563..3141)
DNA (579bp) protein (193aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH-quinone oxidoreductase, chain I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I 2 n=6 Tax=Rhizobium meliloti RepID=NUOI2_RHIME
BD02T64_scaffold_540_6
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3159..4145)
DNA (987bp) protein (329aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH-quinone oxidoreductase subunit H n=1 Tax=Moritella sp. PE36 RepID=A6FCP5_9GAMM
NADH:ubiquinone oxidoreductase
BD02T64_scaffold_540_7
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4403..7384)
DNA (2982bp) protein (994aa)
histidine kinase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002D98F7C rbh
Histidine kinase {ECO:0000313|EMBL:KID08758.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
histidine kinase rbh
BD02T64_scaffold_540_8
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7706..8911
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4LHH6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ16218.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
sodium/hydrogen exchanger
BD02T64_scaffold_540_9
Loktanella sp. S4079, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8993..10132)
DNA (1140bp) protein (380aa)
oxidoreductase n=1 Tax=Ahrensia kielensis RepID=UPI00037A73DE rbh
Oxidoreductase {ECO:0000313|EMBL:KJZ20446.1}; TaxID=579483 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella sp. S4079.;"
oxidoreductase
BD02T64_scaffold_540_10
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10134..11192)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P255_9RHOB rbh
AP endonuclease {ECO:0000313|EMBL:KIC51418.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S1.;"
hypothetical protein
BD02T64_scaffold_540_11
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11264..12220)
DNA (957bp) protein (319aa)
ABC ribose transporter, periplasmic solute-binding protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P256_9RHOB rbh
ABC ribose transporter, periplasmic solute-binding protein {ECO:0000313|EMBL:EAV40912.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labren
ribose ABC transporter, periplasmic ribose-binding protein RbsB
BD02T64_scaffold_540_12
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12317..13336)
DNA (1020bp) protein (340aa)
Putative amino acid or sugar ABC transport system, permease protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R3J9_9RHOB rbh
Putative amino acid or sugar ABC transport system, permease protein {ECO:0000313|EMBL:EEE47895.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
ribose ABC transport system, permease protein RbsC
BD02T64_scaffold_540_13
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13333..14922)
DNA (1590bp) protein (530aa)
ABC transporter, ATP-binding protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R3J8_9RHOB rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEE43306.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenz
ribose ABC transport system, ATP-binding protein RbsA
BD02T64_scaffold_540_14
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15057..16103
DNA (1047bp) protein (349aa)
Periplasmic binding proteins and sugar binding domain of the LacI family, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R3J7_9RHOB
Periplasmic binding proteins and sugar binding domain of the LacI family, putative {ECO:0000313|EMBL:EEE47631.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
transcriptional (co)regulator CytR
BD02T64_scaffold_540_15
Vibrio mytili, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16384..17394)
DNA (1011bp) protein (337aa)
NADPH:quinone reductase n=1 Tax=Vibrio splendidus RepID=UPI0002ED0923
NADPH:quinone reductase {ECO:0000313|EMBL:KIN11250.1}; TaxID=50718 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio mytili.;"
NADPH:quinone reductase
BD02T64_scaffold_540_16
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17442..18938)
DNA (1497bp) protein (499aa)
L-xylulose kinase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7FYC0_9RHIZ rbh
L-xylulose kinase {ECO:0000313|EMBL:ESY18454.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC3
carbohydrate kinase rbh
BD02T64_scaffold_540_17
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18931..19773)
DNA (843bp) protein (281aa)
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Ruegeria sp. R11 RepID=B7QP48_9RHOB
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EEB70900.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobac
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase rbh
BD02T64_scaffold_540_18
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19764..21494)
DNA (1731bp) protein (577aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000370DB1C rbh
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:EAV45808.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia
glpD; glycerol-3-phosphate dehydrogenase rbh
BD02T64_scaffold_540_19
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21556..22551)
DNA (996bp) protein (332aa)
aldo/keto reductase n=1 Tax=Martelella mediterranea RepID=UPI0003796B4B rbh
General stress protein 69 {ECO:0000313|EMBL:EEB71334.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. R11.;"
aldo/keto reductase rbh
BD02T64_scaffold_540_20
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22541..23521)
DNA (981bp) protein (327aa)
Transcriptional regulator, DeoR family n=1 Tax=Ruegeria sp. R11 RepID=B7QP51_9RHOB rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EEB70404.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rueger
DeoR family transcriptional regulator rbh
BD02T64_scaffold_540_21
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23536..24537)
DNA (1002bp) protein (334aa)
ABC transporter permease n=2 Tax=Labrenzia RepID=U7FJB6_9RHOB rbh
ABC transporter permease {ECO:0000313|EMBL:ERP86110.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B1
inner-membrane translocator rbh
BD02T64_scaffold_540_22
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24546..26066)
DNA (1521bp) protein (507aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobac
D-ribose transporter ATP binding protein n=2 Tax=Labrenzia RepID=U7FP68_9RHOB rbh
ABC transporter rbh
BD02T64_scaffold_540_23
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26151..27170)
DNA (1020bp) protein (340aa)
ABC transporter, substrate binding protein (Sugar) n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNT2_9RHOB rbh
ABC transporter, substrate binding protein (Sugar) {ECO:0000313|EMBL:EAV45813.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" s
sugar ABC transporter (sugar-binding protein) rbh
BD02T64_scaffold_540_24
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27973..29391
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XBZ6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ44655.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
hypothetical protein rbh
BD02T64_scaffold_540_25
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30070..30435
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ89744.1}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas jannasch
BD02T64_scaffold_540_26
unknown

Not on your lists

30432..31730
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC02_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CPR19149.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
hypothetical protein
BD02T64_scaffold_540_27
unknown

Not on your lists

comp(31872..32258)
DNA (387bp) protein (129aa)

This feature has no annotations

BD02T64_scaffold_540_28
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32434..32790)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ahrensia sp. R2A130 RepID=E0MK83_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EFL90212.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;
BD02T64_scaffold_540_29
unknown

Not on your lists

comp(32834..33070)
DNA (237bp) protein (79aa)

This feature has no annotations

BD02T64_scaffold_540_30
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33105..35042)
DNA (1938bp) protein (646aa)
TraG family conjugal transfer-like protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZJN4_ROSLO rbh
TraG family conjugal transfer-like protein rbh
TraG family conjugal transfer-like protein {ECO:0000313|EMBL:AEI93865.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source=
Displaying items 1-30 of 48 in total

View Taxonomy