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BD02T64_scaffold_874

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_874_1
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..275
DNA (273bp) protein (91aa)
UPI0003D6A5B1 related cluster n=1 Tax=unknown RepID=UPI0003D6A5B1 rbh
DNA polymerase III subunit alpha {ECO:0000313|EMBL:KIC35405.1}; Flags: Fragment;; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;"
DNA polymerase III subunit alpha
BD02T64_scaffold_874_2
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322..834
DNA (513bp) protein (171aa)
Lipoprotein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTR4_RUEPO rbh
lipoprotein, putative
Lipoprotein, putative {ECO:0000313|EMBL:AAV94637.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (stra
BD02T64_scaffold_874_3
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

902..1570
DNA (669bp) protein (223aa)
Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X4J7_9RHOB rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KIC35407.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="L
Crp/Fnr family transcription regulator rbh
BD02T64_scaffold_874_4
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1962..3488)
DNA (1527bp) protein (509aa)
degP; protease do (EC:3.4.21.-) rbh
Periplasmic serine protease, DO/DeqQ family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X4K1_9RHOB rbh
Serine protease {ECO:0000313|EMBL:KIC07506.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1.;"
BD02T64_scaffold_874_5
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3728..3922)
DNA (195bp) protein (65aa)
UPI0003D6B418 related cluster n=1 Tax=unknown RepID=UPI0003D6B418 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC35409.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
BD02T64_scaffold_874_6
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3922..4800)
DNA (879bp) protein (293aa)
Protein HflC n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTT2_RUEPO rbh
hflC; HflC protein rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC
BD02T64_scaffold_874_7
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4800..5945)
DNA (1146bp) protein (382aa)
membrane protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002EE4A78 rbh
Membrane protein {ECO:0000313|EMBL:KIC19814.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
HflK protein rbh
BD02T64_scaffold_874_8
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6014..7372)
DNA (1359bp) protein (453aa)
UPI0003D6AD94 related cluster n=1 Tax=unknown RepID=UPI0003D6AD94 rbh
NADPH-glutathione reductase rbh
NADPH-glutathione reductase {ECO:0000313|EMBL:AHD00263.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera meth
BD02T64_scaffold_874_9
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7398..8186)
DNA (789bp) protein (263aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
rpiA; ribose 5-phosphate isomerase (EC:5.3.1.6) rbh
Ribose-5-phosphate isomerase A n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=RPIA_RUEPO rbh
BD02T64_scaffold_874_10
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8385..9092
DNA (708bp) protein (236aa)
glutathione S-transferase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002DB9ECA rbh
Glutathione S-transferase {ECO:0000313|EMBL:KID11088.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. A
glutathione S-transferase rbh
BD02T64_scaffold_874_11
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9092..10465
DNA (1374bp) protein (458aa)
sdaA; L-serine ammonia-lyase (EC:4.3.1.17) rbh
L-serine ammonia-lyase {ECO:0000313|EMBL:AAV94612.1}; EC=4.3.1.17 {ECO:0000313|EMBL:AAV94612.1};; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
L-serine ammonia-lyase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTT9_RUEPO rbh
BD02T64_scaffold_874_12
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10528..11460
DNA (933bp) protein (311aa)
Putative integral membrane protein n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7EE21_PHAG2 rbh
hypothetical protein rbh
Putative integral membrane protein {ECO:0000313|EMBL:AFO88163.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeoba
BD02T64_scaffold_874_13
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11426..12088)
DNA (663bp) protein (221aa)
Thiamine pyrophosphokinase {ECO:0000313|EMBL:EDZ45986.1}; EC=2.7.6.2 {ECO:0000313|EMBL:EDZ45986.1};; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rho
Thiamine pyrophosphokinase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B8W7_9RHOB rbh
thiamine pyrophosphokinase
BD02T64_scaffold_874_14
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12236..14488
DNA (2253bp) protein (751aa)
Putative CheA signal transduction histidine kinase n=2 Tax=Ruegeria RepID=C9CWA0_9RHOB rbh
Putative CheA signal transduction histidine kinase {ECO:0000313|EMBL:EEW59309.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" so
hypothetical protein rbh
BD02T64_scaffold_874_15
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14558..14797)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X4K7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ47672.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
hypothetical protein
BD02T64_scaffold_874_16
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14797..16092)
DNA (1296bp) protein (432aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B8X0_9RHOB
BD02T64_scaffold_874_17
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16233..16565)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002FA03A8 rbh
Nitrile hydratase {ECO:0000313|EMBL:KID09398.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
hypothetical protein
BD02T64_scaffold_874_18
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16562..17239)
DNA (678bp) protein (226aa)
Nitrile hydratase, beta subunit n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B8X2_9RHOB rbh
Nitrile hydratase {ECO:0000313|EMBL:KIC14781.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
nitrile hydratase rbh
BD02T64_scaffold_874_19
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17236..17850)
DNA (615bp) protein (205aa)
nitrile hydratase n=1 Tax=Ruegeria conchae RepID=UPI000237A91D rbh
Nitrile hydratase {ECO:0000313|EMBL:KIC12378.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1.;"
nitrile hydratase rbh
BD02T64_scaffold_874_20
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18013..18387
DNA (375bp) protein (125aa)
Preprotein translocase secG-like protein n=2 Tax=Phaeobacter RepID=I7E2U1_PHAIB rbh
protein translocase, SecG subunit
Preprotein translocase secG-like protein {ECO:0000313|EMBL:AFO88180.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="P
BD02T64_scaffold_874_21
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18559..20202
DNA (1644bp) protein (548aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
pyrG; CTP synthetase (EC:6.3.4.2) rbh
CTP synthase n=1 Tax=Roseobacter sp. MED193 RepID=A3X4L6_9RHOB rbh
BD02T64_scaffold_874_22
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20437..21339
DNA (903bp) protein (301aa)
Fructose-bisphosphate aldolase class-I {ECO:0000313|EMBL:EEW59528.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EEW59528.1};; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
fructose-bisphosphate aldolase (EC:4.1.2.13) rbh
Fructose-bisphosphate aldolase class-I n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CW90_9RHOB rbh
BD02T64_scaffold_874_23
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21529..22311)
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CWU6_9RHOB rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:EEX08127.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacuscaerule
enoyl-CoA hydratase/isomerase family protein
BD02T64_scaffold_874_24
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22433..23545
DNA (1113bp) protein (371aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9) rbh
Histidinol-phosphate aminotransferase {ECO:0000313|EMBL:AHD00244.1}; EC=2.6.1.9 {ECO:0000313|EMBL:AHD00244.1};; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rh
UPI0003D6B0B9 related cluster n=1 Tax=unknown RepID=UPI0003D6B0B9 rbh
BD02T64_scaffold_874_25
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23641..23820
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B8Y4_9RHOB rbh
Histidinol phosphate aminotransferase {ECO:0000313|EMBL:KID09412.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leis
histidinol phosphate aminotransferase
BD02T64_scaffold_874_26
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23891..25144)
DNA (1254bp) protein (418aa)
septum site-determining protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002ED174B rbh
Septum site-determining protein {ECO:0000313|EMBL:KID09413.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera
serine-glyoxylate aminotransferase rbh
BD02T64_scaffold_874_27
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25331..27187
DNA (1857bp) protein (619aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Ruegeria sp. R11 RepID=B7QWJ5_9RHOB rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:EEB70706.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" sour
msbA2; lipid A export ATP-binding/permease protein MsbA rbh
BD02T64_scaffold_874_28
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27227..27907)
DNA (681bp) protein (227aa)
UPI0003D6D2B7 related cluster n=1 Tax=unknown RepID=UPI0003D6D2B7 rbh
glycosyl transferase rbh
Glycosyl transferase {ECO:0000313|EMBL:AHD00241.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohali
BD02T64_scaffold_874_29
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27986..28726
DNA (741bp) protein (247aa)
Glycine cleavage T protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B8Y8_9RHOB rbh
Glycine cleavage T protein {ECO:0000313|EMBL:EDZ45579.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
folate-binding protein YgfZ
BD02T64_scaffold_874_30
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28783..29706
DNA (924bp) protein (308aa)
ABC transporter, permease protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NNP8_9RHOB rbh
ABC transporter permease {ECO:0000313|EMBL:KIC43127.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.
ABC transporter, permease protein
Displaying items 1-30 of 41 in total

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