ggKbase home page

BD02T64_scaffold_985

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_985_1
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..78
DNA (78bp) protein (26aa)
Putative IS3 family transposase {ECO:0000313|EMBL:ACV81783.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus
BD02T64_scaffold_985_2
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

378..869
DNA (492bp) protein (164aa)
UPI0003D6B85C related cluster n=1 Tax=unknown RepID=UPI0003D6B85C rbh
virion morphogenesis protein
Virion morphogenesis protein {ECO:0000313|EMBL:AHD01186.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera met
BD02T64_scaffold_985_3
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1110..1472
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EV43_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA16413.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
hypothetical protein
BD02T64_scaffold_985_4
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2142..4034
DNA (1893bp) protein (631aa)
Propionyl-CoA synthetase {ECO:0000313|EMBL:KIC17738.1}; EC=6.2.1.17 {ECO:0000313|EMBL:KIC17738.1};; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterac
propionyl-CoA synthetase (EC:6.2.1.17)
acyl-CoA synthetase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00036D3BF1 rbh
BD02T64_scaffold_985_5
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4158..5594
DNA (1437bp) protein (479aa)
Amidase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B6P2_9RHOB rbh
Amidase {ECO:0000313|EMBL:EDZ45475.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
amidase rbh
BD02T64_scaffold_985_6
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5786..6553)
DNA (768bp) protein (256aa)
NAD kinase {ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.- {ECO:0000256|SAAS:SAAS00274461};; EC=2.7.1.23 {ECO:0000256|SAAS:SAAS00037533};; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacte
Putative ATP-NAD kinase n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7DPB6_PHAIB rbh
ATP-NAD kinase rbh
BD02T64_scaffold_985_7
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6720..8015
DNA (1296bp) protein (432aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
serine hydroxymethyltransferase (EC:2.1.2.1) rbh
Serine hydroxymethyltransferase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B6P4_9RHOB rbh
BD02T64_scaffold_985_8
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8406..9239
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruegeria mobilis F1926 RepID=R0FCS4_9RHOB rbh
Membrane protein {ECO:0000313|EMBL:KIC12833.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1.;"
hypothetical protein rbh
BD02T64_scaffold_985_9
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9327..9614)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002FF27B8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KID10871.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
BD02T64_scaffold_985_10
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9690..10367)
DNA (678bp) protein (226aa)
phage-shock protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI000317313C rbh
Phage-shock protein {ECO:0000313|EMBL:KIC18503.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.
phage shock protein A, PspA
BD02T64_scaffold_985_11
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10453..11055)
DNA (603bp) protein (201aa)
TetR family transcriptional regulator n=1 Tax=Phaeobacter gallaeciensis RepID=UPI000310825A rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC18499.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leis
hypothetical protein
BD02T64_scaffold_985_12
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11120..11485)
DNA (366bp) protein (122aa)
UPI0003D6C082 related cluster n=1 Tax=unknown RepID=UPI0003D6C082 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC12834.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
BD02T64_scaffold_985_13
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11595..12353
DNA (759bp) protein (253aa)
UPI0003D6CBF3 related cluster n=1 Tax=unknown RepID=UPI0003D6CBF3 rbh
esterase rbh
Esterase {ECO:0000313|EMBL:AHD00486.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohalidivorans DSM
BD02T64_scaffold_985_14
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12374..12556)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Phaeobacter RepID=I7DZL9_PHAIB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC18496.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
BD02T64_scaffold_985_15
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12764..13360)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B8T5_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ45285.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
hypothetical protein
BD02T64_scaffold_985_16
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13389..13679)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI000237A2C5
Uncharacterized protein {ECO:0000313|EMBL:KIC41742.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.
hypothetical protein
BD02T64_scaffold_985_17
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14428..14634
DNA (207bp) protein (69aa)
UPI0003D6C311 related cluster n=1 Tax=unknown RepID=UPI0003D6C311
cold-shock protein
Cold-shock protein {ECO:0000313|EMBL:AHD02799.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohalidi
BD02T64_scaffold_985_18
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14757..15473)
DNA (717bp) protein (239aa)
Hydrolase, alpha/beta fold family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XB39_9RHOB rbh
Hydrolase, alpha/beta fold family protein {ECO:0000313|EMBL:EAQ44848.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="
carboxylesterase bioH-like protein rbh
BD02T64_scaffold_985_19
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15717..16145)
DNA (429bp) protein (143aa)
glyoxalase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00035CD775 rbh
Glyoxalase {ECO:0000313|EMBL:KID10923.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
glyoxalase
BD02T64_scaffold_985_20
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16142..17134)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00038286DF rbh
Uncharacterized protein {ECO:0000313|EMBL:KID10924.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
BD02T64_scaffold_985_21
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17134..17883)
DNA (750bp) protein (250aa)
Alpha/beta hydrolase family protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B7F6_9RHOB rbh
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:EDZ47409.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
alpha/beta hydrolase rbh
BD02T64_scaffold_985_22
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18022..19026
DNA (1005bp) protein (335aa)
UPI0003D6D389 related cluster n=1 Tax=unknown RepID=UPI0003D6D389 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFO87974.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter gallae
BD02T64_scaffold_985_23
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19214..21172
DNA (1959bp) protein (653aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase ThrS (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZAJ0_ROSLO rbh
BD02T64_scaffold_985_24
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21392..21697
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11 RepID=B7QY74_9RHOB rbh
Signal peptide protein {ECO:0000313|EMBL:KII16911.1}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter sp. S2
putative integral membrane protein
BD02T64_scaffold_985_25
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21797..22654
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7EN17_PHAG2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFO87977.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter gallae
BD02T64_scaffold_985_26
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22651..23406
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002F61E3C rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC35315.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein rbh
BD02T64_scaffold_985_27
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23411..23974
DNA (564bp) protein (188aa)
DoxX n=1 Tax=Ruegeria sp. R11 RepID=B7QY71_9RHOB rbh
DoxX {ECO:0000313|EMBL:EEB72810.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. R11.;"
hypothetical protein
BD02T64_scaffold_985_28
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24038..24406)
DNA (369bp) protein (123aa)
UPI0003D6AD69 related cluster n=1 Tax=unknown RepID=UPI0003D6AD69 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC21724.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
BD02T64_scaffold_985_29
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24449..24703)
DNA (255bp) protein (85aa)
Arsenate reductase and related n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GFV7_RUEST
arsenate reductase
Arsenate reductase and related {ECO:0000313|EMBL:ABF64459.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. (
BD02T64_scaffold_985_30
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24988..25194
DNA (207bp) protein (69aa)
Conserved domain protein n=2 Tax=Ruegeria RepID=C9D257_9RHOB rbh
Cold-shock protein {ECO:0000313|EMBL:KJZ22240.1}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis.;"
cold-shock DNA-binding protein family protein
Displaying items 1-30 of 46 in total

View Taxonomy