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BD02T64_scaffold_1406

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1406_1
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..330
DNA (330bp) protein (110aa)
Sterol desaturase-like protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LW18_RUEPO
sterol desaturase-like protein
Sterol desaturase-like protein {ECO:0000313|EMBL:AAV93842.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomer
BD02T64_scaffold_1406_2
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

330..986
DNA (657bp) protein (219aa)
UPI0003D6A393 related cluster n=1 Tax=unknown RepID=UPI0003D6A393 rbh
Ferredoxin {ECO:0000313|EMBL:KIC15171.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
hypothetical protein
BD02T64_scaffold_1406_3
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

983..1480
DNA (498bp) protein (166aa)
Phosphoglycerate mutase family protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BD89_9RHOB rbh
Phosphoglycerate mutase {ECO:0000313|EMBL:KIC11662.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
phosphoglycerate mutase
BD02T64_scaffold_1406_4
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1593..2384)
DNA (792bp) protein (264aa)
Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LW21_RUEPO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC41378.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria
glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein
BD02T64_scaffold_1406_5
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2397..3884)
DNA (1488bp) protein (496aa)
Amino acid ABC transporter permease n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ENC4_9RHOB rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:ESW61662.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodo
polar amino acid ABC transporter inner membrane subunit
BD02T64_scaffold_1406_6
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3886..5154)
DNA (1269bp) protein (423aa)
UPI0003D69F21 related cluster n=1 Tax=unknown RepID=UPI0003D69F21 rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KIC41084.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria
amino acid ABC transporter permease
BD02T64_scaffold_1406_7
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5287..6303)
DNA (1017bp) protein (339aa)
Glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPD8_9RHOB rbh
Glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:EBA18330.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhod
glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein
BD02T64_scaffold_1406_8
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6557..7261)
DNA (705bp) protein (235aa)
ATP12 ATPase n=1 Tax=Ruegeria sp. R11 RepID=B7QX43_9RHOB rbh
ATPase {ECO:0000313|EMBL:KIC11667.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1.;"
hypothetical protein
BD02T64_scaffold_1406_9
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7265..7933)
DNA (669bp) protein (223aa)
HAD family hydrolase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0003093A5E rbh
HAD family hydrolase {ECO:0000313|EMBL:KIC11668.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1
hydrolase rbh
BD02T64_scaffold_1406_10
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7930..8976)
DNA (1047bp) protein (349aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
rluC; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Roseovarius sp. TM1035 RepID=A6E221_9RHOB
BD02T64_scaffold_1406_11
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8973..9269)
DNA (297bp) protein (99aa)
Putative fluoride ion transporter CrcB n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BD98_9RHOB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.
camphor resistance protein CrcB
BD02T64_scaffold_1406_12
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9472..10785)
DNA (1314bp) protein (438aa)
Replication-associated recombination protein A n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7DID3_PHAG2 rbh
rarA; replication-associated recombination protein A rbh
Replication-associated recombination protein A {ECO:0000313|EMBL:AFO88866.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" sou
BD02T64_scaffold_1406_13
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10788..12173)
DNA (1386bp) protein (462aa)
Peptidase S1C, Do n=1 Tax=Ruegeria sp. R11 RepID=B7QX38_9RHOB rbh
Peptidase S1C, Do {ECO:0000313|EMBL:EEB72821.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. R11.;"
serine protease rbh
BD02T64_scaffold_1406_14
unknown

Not on your lists

12406..12681
DNA (276bp) protein (92aa)

This feature has no annotations

BD02T64_scaffold_1406_15

Not on your lists


comp(12836..13258)
DNA (423bp) protein (141aa)
50S ribosomal protein L17 n=2 Tax=Sulfitobacter RepID=A3S826_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN35266.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rplQ; 50S ribosomal protein L17
BD02T64_scaffold_1406_16
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13407..14423)
DNA (1017bp) protein (339aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=2 Tax=Phaeobacter RepID=I7DTR7_PHAG2 rbh
BD02T64_scaffold_1406_17
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14540..14929)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Roseobacter sp. MED193 RepID=A3X435_9RHOB
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter
SSU ribosomal protein S11P
BD02T64_scaffold_1406_18
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14945..15313)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Celeribacter baekdonensis B30 RepID=K2IYT4_9RHOB
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribact
rpsM; ribosomal protein S13
BD02T64_scaffold_1406_19
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15552..15932)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDA7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC36936.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
BD02T64_scaffold_1406_20
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16008..16649)
DNA (642bp) protein (214aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adk-1; adenylate kinase (EC:2.7.4.3) rbh
Adenylate kinase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CUN3_9RHOB rbh
BD02T64_scaffold_1406_21
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16646..18010)
DNA (1365bp) protein (455aa)
UPI0003D6C589 related cluster n=1 Tax=unknown RepID=UPI0003D6C589 rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
secY; preprotein translocase subunit SecY rbh
BD02T64_scaffold_1406_22
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18123..18596)
DNA (474bp) protein (158aa)
50S ribosomal protein L15 n=1 Tax=Ruegeria mobilis F1926 RepID=R0DSS6_9RHOB rbh
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rueg
rplO; 50S ribosomal protein L15
BD02T64_scaffold_1406_23
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18813..19376
DNA (564bp) protein (188aa)
Putative ion channel protein n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7ET57_PHAG2 rbh
ion channel protein
Putative ion channel protein {ECO:0000313|EMBL:AFO88875.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter g
BD02T64_scaffold_1406_24
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19825..20823)
DNA (999bp) protein (333aa)
Oxidoreductase n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7DSZ1_PHAG2 rbh
oxidoreductase rbh
Oxidoreductase {ECO:0000313|EMBL:AFO88604.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter gallaeciensis (
BD02T64_scaffold_1406_25
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20984..21199)
DNA (216bp) protein (72aa)
UPI0003D6AFB0 related cluster n=1 Tax=unknown RepID=UPI0003D6AFB0 rbh
putative small protein
Uncharacterized protein {ECO:0000313|EMBL:AHD08117.1}; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter galla
BD02T64_scaffold_1406_26
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21396..21776)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2J0I8_9RHIZ
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:EUB97013.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu
Glutathione-dependent formaldehyde-activating GFA
BD02T64_scaffold_1406_27
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21823..22242)
DNA (420bp) protein (140aa)
membrane protein n=1 Tax=Ruegeria conchae RepID=UPI000237AF98
Membrane protein {ECO:0000313|EMBL:KIC42086.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.;"
membrane protein
BD02T64_scaffold_1406_28
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22506..22694)
DNA (189bp) protein (63aa)
50S ribosomal protein L30 n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZL90_ROSLO rbh
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rose
BD02T64_scaffold_1406_29
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22707..23282)
DNA (576bp) protein (192aa)
UPI0003D6D163 related cluster n=1 Tax=unknown RepID=UPI0003D6D163 rbh
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisi
BD02T64_scaffold_1406_30
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23396..23755)
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Ruegeria conchae RepID=UPI0002378A6E
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. A
rplR; 50S ribosomal protein L18
Displaying items 1-30 of 39 in total

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