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BD02T64_scaffold_1432

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1432_1
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1..231
DNA (231bp) protein (77aa)
30S ribosomal protein S16 n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BEA8_9RHOB
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera s
rpsP; 30S ribosomal protein S16
BD02T64_scaffold_1432_2
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236..877
DNA (642bp) protein (214aa)
cob(II)yrinic acid a,c-diamide reductase (EC:1.14.99.40 1.16.8.1) rbh
Uncharacterized protein {ECO:0000313|EMBL:AHD07990.1}; EC=1.13.11.79 {ECO:0000313|EMBL:AHD07990.1};; EC=1.16.8.1 {ECO:0000313|EMBL:AHD07990.1};; TaxID=1423144 species="Bacteria; Proteobacteria; Alphap
UPI0003D6B712 related cluster n=1 Tax=unknown RepID=UPI0003D6B712 rbh
BD02T64_scaffold_1432_3
unknown

Not on your lists

874..1029
DNA (156bp) protein (52aa)

This feature has no annotations

BD02T64_scaffold_1432_4
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1022..1525
DNA (504bp) protein (168aa)
Ribosome maturation factor RimM n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BEB1_9RHOB rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
rimM; 16S rRNA-processing protein RimM
BD02T64_scaffold_1432_5
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1640..2446
DNA (807bp) protein (269aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.228) rbh
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NSI1_9RHOB rbh
BD02T64_scaffold_1432_6
unknown

Not on your lists

comp(2426..2569)
DNA (144bp) protein (48aa)

This feature has no annotations

BD02T64_scaffold_1432_7
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2831..3205
DNA (375bp) protein (125aa)
50S ribosomal protein L19 n=2 Tax=Rhodobacteraceae RepID=A4ES95_9RHOB rbh
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Plan
BD02T64_scaffold_1432_8
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3217..3438
DNA (222bp) protein (74aa)
50S ribosomal protein L31 n=1 Tax=Roseobacter sp. MED193 RepID=A3X618_9RHOB rbh
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rose
50S ribosomal protein L31
BD02T64_scaffold_1432_9
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3628..4437
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ES98_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA17268.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
ATPase rbh
BD02T64_scaffold_1432_10
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4467..5687)
DNA (1221bp) protein (407aa)
Adenylate cyclase domain-containing protein n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7DWI6_PHAIB rbh
adenylate cyclase domain-containing protein rbh
Adenylate cyclase domain-containing protein {ECO:0000313|EMBL:AFO89794.1}; TaxID=391619 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source
BD02T64_scaffold_1432_11
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5738..6178)
DNA (441bp) protein (147aa)
Transcriptional regulator, MarR family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESA0_9RHOB rbh
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:EBA17270.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" sou
MarR family transcriptional regulator
BD02T64_scaffold_1432_12
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6251..7612
DNA (1362bp) protein (454aa)
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:EEB71747.1}; EC=1.13.11.5 {ECO:0000313|EMBL:EEB71747.1};; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobac
homogentisate 1,2-dioxygenase (EC:1.13.11.5) rbh
Homogentisate 1,2-dioxygenase n=1 Tax=Ruegeria sp. R11 RepID=B7QW54_9RHOB rbh
BD02T64_scaffold_1432_13
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7701..8906
DNA (1206bp) protein (402aa)
hmgB; fumarylacetoacetase (EC:3.7.1.2) rbh
Fumarylacetoacetase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESA2_9RHOB rbh
Fumarylacetoacetase {ECO:0000313|EMBL:EBA17272.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK209-
BD02T64_scaffold_1432_14
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8911..9279
DNA (369bp) protein (123aa)
Glyoxalase family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVL6_RUEPO rbh
glyoxalase family protein
Glyoxalase family protein {ECO:0000313|EMBL:AAV93992.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (
BD02T64_scaffold_1432_15
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9276..9809
DNA (534bp) protein (178aa)
Dihydrofolate reductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN13_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS37935.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium
bifunctional deaminase-reductase domain-containing protein
BD02T64_scaffold_1432_16
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9815..10765
DNA (951bp) protein (317aa)
UPI0003D6D7AE related cluster n=1 Tax=unknown RepID=UPI0003D6D7AE rbh
beta lactamase rbh
Beta lactamase {ECO:0000313|EMBL:AHC99362.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohalidivora
BD02T64_scaffold_1432_17
unknown

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10765..11289
DNA (525bp) protein (175aa)

This feature has no annotations

BD02T64_scaffold_1432_18
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11456..13066
DNA (1611bp) protein (537aa)
FAD-dependent oxidoreductase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00037C4A48 rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KID07878.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp
FAD-dependent oxidoreductase rbh
BD02T64_scaffold_1432_19
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13071..13280
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESA5_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA17275.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
hypothetical protein
BD02T64_scaffold_1432_20
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13277..13819
DNA (543bp) protein (181aa)
Glyoxalase family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESA6_9RHOB rbh
Glyoxalase family protein {ECO:0000313|EMBL:EBA17276.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp.
Lactoylglutathione lyase rbh
BD02T64_scaffold_1432_21
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13889..14527
DNA (639bp) protein (213aa)
hmgC; maleylacetoacetate isomerase (EC:5.2.1.2) rbh
Maleylacetoacetate isomerase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESA7_9RHOB rbh
Maleylacetoacetate isomerase {ECO:0000313|EMBL:EBA17277.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter s
BD02T64_scaffold_1432_22
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14596..15009)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZA32_ROSLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI94185.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litora
BD02T64_scaffold_1432_23
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15095..16168)
DNA (1074bp) protein (358aa)
Type I secretion target repeat protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RT92_9RHOB rbh
Type I secretion target repeat protein {ECO:0000313|EMBL:EPX81300.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="
hypothetical protein
BD02T64_scaffold_1432_24
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16306..17067)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CYE3_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEX08405.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter
hypothetical protein
BD02T64_scaffold_1432_25
Roseivivax halodurans, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17190..18461)
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RHY0_9RHOB
Membrane protein {ECO:0000313|EMBL:ETX13018.1}; TaxID=1449350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax halodurans JCM
capsular biosynthesis protein
BD02T64_scaffold_1432_26
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18458..19939)
DNA (1482bp) protein (494aa)
Tyrosine-protein kinase Wzc (EC:2.7.10.2)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00031C32FE rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC36971.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
BD02T64_scaffold_1432_27
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20063..20677)
DNA (615bp) protein (205aa)
DNA-binding response regulator, LuxR family protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FMQ9_PELBH
Chemotaxis protein CheY {ECO:0000313|EMBL:KEP71181.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianens
LuxR family transcriptional regulator
BD02T64_scaffold_1432_28
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20917..22308
DNA (1392bp) protein (464aa)
Undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6)
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Citreicella sp. SE45 RepID=D0D9R2_9RHOB rbh
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EEX13478.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source
BD02T64_scaffold_1432_29
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22463..22969
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AGC8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KCV83309.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium a
oxidoreductase, molybdopterin binding
BD02T64_scaffold_1432_30
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23002..25581
DNA (2580bp) protein (860aa)
sensor protein histidine kinase (EC:2.7.13.3)
Sensory box histidine kinase/response regulator n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CNP9_9RHOB rbh
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:EEX11371.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" sourc
Displaying items 1-30 of 40 in total

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