ggKbase home page

BD02T64_scaffold_431

Search features with annotation key words

Displaying items 1-30 of 48 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_431_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

58..1986
DNA (1929bp) protein (643aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Tetratricopeptide-like helical id=2821670 bin=GWF2_Bacteroidetes_35_48 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
hypothetical protein
BD02T64_scaffold_431_2
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2022..3050)
DNA (1029bp) protein (343aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
aspartate-semialdehyde dehydrogenase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4F6A6
aspartate-semialdehyde dehydrogenase
BD02T64_scaffold_431_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

3240..4100
DNA (861bp) protein (287aa)
hypothetical protein
hypothetical protein MsalJ2_02872 id=3869745 bin=GWF2_Bacteroidetes_33_16 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
BD02T64_scaffold_431_4
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4546..6054
DNA (1509bp) protein (503aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R0U3_OWEHD
ATP synthase F1 subunit beta
BD02T64_scaffold_431_5
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

6068..6355
DNA (288bp) protein (96aa)
ATPase; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
ATPase, F1 complex, delta/epsilon subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAH6_FLUTR rbh
ATPase
BD02T64_scaffold_431_6
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists


comp(6424..7224)
DNA (801bp) protein (267aa)
Ribosomal RNA small subunit methyltransferase A id=2666880 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
ksgA; dimethyladenosine transferase
Tax=BJP_IG2102_Bacteroidetes_40_9
BD02T64_scaffold_431_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(7224..7523)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8QZZ6_OWEHD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
BD02T64_scaffold_431_8
unknown

Not on your lists

comp(7589..8455)
DNA (867bp) protein (289aa)

This feature has no annotations

BD02T64_scaffold_431_9
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8459..10576)
DNA (2118bp) protein (706aa)
Protein containing a thioredoxin domain n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTF5_SOLCM rbh
protein containing a thioredoxin domain
Protein containing a thioredoxin domain {ECO:0000313|EMBL:AFD06292.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="So
BD02T64_scaffold_431_10
unknown

Not on your lists

10621..11190
DNA (570bp) protein (190aa)

This feature has no annotations

BD02T64_scaffold_431_11
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11268..12593
DNA (1326bp) protein (442aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=926562 sp
Hydroxymethylglutaryl-CoA reductase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R795_OWEHD rbh
hydroxymethylglutaryl-CoA reductase
BD02T64_scaffold_431_12
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12593..13510
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7MKE2_9FLAO
GHMP kinase
Uncharacterized protein {ECO:0000313|EMBL:EMQ95566.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
BD02T64_scaffold_431_13
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13507..15912)
DNA (2406bp) protein (802aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria
Multi-sensor Signal Transduction Histidine Kinase n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J4H5_9FLAO rbh
PAS sensor protein
BD02T64_scaffold_431_14
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15982..16737
DNA (756bp) protein (252aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO28063.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.
ial:IALB_3182 Signal transduction histidine kinase id=720765 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
histidine kinase
BD02T64_scaffold_431_15
unknown

Not on your lists

comp(16734..16973)
DNA (240bp) protein (80aa)

This feature has no annotations

BD02T64_scaffold_431_16
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

17123..19036
DNA (1914bp) protein (638aa)
Peptidase M1 membrane alanine aminopeptidase id=4153200 bin=GWF2_Bacteroidetes_43_63 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
peptidase M1 membrane alanine aminopeptidase Tax=GWF2_Bacteroidetes_43_63_curated
peptidase M1 membrane alanine aminopeptidase
BD02T64_scaffold_431_17
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19039..19764)
DNA (726bp) protein (242aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZTP0_9BACT rbh
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:KJS06972.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_
glycosyl transferase family protein
BD02T64_scaffold_431_18
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19998..22760
DNA (2763bp) protein (921aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1263089 species="Bacteria; Bacter
Leucine--tRNA ligase n=1 Tax=Odoribacter laneus CAG:561 RepID=R5VJZ5_9PORP
leucyl-tRNA synthetase
BD02T64_scaffold_431_19
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23068..23715)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4ALS7_FLELS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM04912.1}; Flags: Precursor;; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter lit
BD02T64_scaffold_431_20

Not on your lists

23877..25331
DNA (1455bp) protein (485aa)
sfu:Sfum_1332 spermine synthase id=130655 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE21971.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
spermine synthase
BD02T64_scaffold_431_21
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25386..26561)
DNA (1176bp) protein (392aa)
acyl-CoA dehydrogenase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00036BE395
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJS05741.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
acyl-CoA dehydrogenase
BD02T64_scaffold_431_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26685..27539
DNA (855bp) protein (285aa)
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein AnHS1_13860 id=1819800 bin=GWD2_Bacteroidetes_33_33 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152 rbh
hypothetical protein
BD02T64_scaffold_431_23
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27584..28336
DNA (753bp) protein (251aa)
uroporphyrinogen-III synthase id=4182714 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:GAF05383.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis ferm
uroporphyrinogen-III synthase
BD02T64_scaffold_431_24

Not on your lists

28424..28792
DNA (369bp) protein (123aa)
Ribonuclease P protein component n=1 Tax=Tannerella sp. CAG:51 RepID=R7DMA1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKN47100.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribonuclease P
BD02T64_scaffold_431_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

28782..30452
DNA (1671bp) protein (557aa)
C-terminal processing peptidase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
carboxyl-terminal protease id=4840757 bin=GWC2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
C-terminal processing peptidase
BD02T64_scaffold_431_26
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30521..32041
DNA (1521bp) protein (507aa)
Putative uncharacterized protein id=4156328 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
BD02T64_scaffold_431_27
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(32046..32810)
DNA (765bp) protein (255aa)
Lipopolysaccharide biosynthesis glycosyltransferase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZR67_9BACT
waaE; lipopolysaccharide core biosynthesis glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
glycosyl transferase
BD02T64_scaffold_431_28
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(32807..35284)
DNA (2478bp) protein (826aa)
bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=CG_Bacteroid_01
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=1744935 bin=GWB2_Bacteroidetes_32_14 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47 rbh
alanine racemase
BD02T64_scaffold_431_29
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(35265..35891)
DNA (627bp) protein (209aa)
thymidine kinase (EC:2.7.1.21) Tax=CG_Bacteroid_01
Thymidine kinase n=1 Tax=unidentified eubacterium SCB49 RepID=A6EL29_9BACT
thymidine kinase
BD02T64_scaffold_431_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36120..37007
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSX4_CHIPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59013.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
Displaying items 1-30 of 48 in total

View Taxonomy