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BD02T64_scaffold_415

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Displaying items 1-30 of 81 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_415_1
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1432)
DNA (1431bp) protein (477aa)
Cobalamin biosynthesis protein CobN {ECO:0000313|EMBL:KIC39669.1}; EC=6.6.1.2 {ECO:0000313|EMBL:KIC39669.1};; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
cobN; aerobic cobaltochelatase subunit CobN (EC:6.6.1.2)
Cobaltochelatase, CobN subunit n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B9V7_9RHOB
BD02T64_scaffold_415_2
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1439..2473)
DNA (1035bp) protein (345aa)
UPI0003D6B139 related cluster n=1 Tax=unknown RepID=UPI0003D6B139
Cobalamin biosynthesis protein CobW {ECO:0000313|EMBL:KIC09789.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisin
CobW
BD02T64_scaffold_415_3
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2480..2839)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EUD8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KCV81264.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium a
putative metal-binding protein
BD02T64_scaffold_415_4
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3187..3807
DNA (621bp) protein (207aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase CobO (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase CobO n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7EJZ8_PHAG2
Cobinamide adenolsyltransferase {ECO:0000313|EMBL:KGB80452.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum
BD02T64_scaffold_415_5
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3861..5258
DNA (1398bp) protein (466aa)
cobQ1; cobyric acid synthase CobQ (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2R5_9RHOB rbh
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovu
BD02T64_scaffold_415_6

Not on your lists

comp(5255..5878)
DNA (624bp) protein (208aa)
cobC_bluB; putative threonine-phosphate decarboxylase/cob(II)yrinic acid a,c-diamide reductase (EC:1.16.8.1 4.1.1.81)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AGF7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD60776.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
BD02T64_scaffold_415_7
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5868..6860)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000375EBCB rbh
Cobalamin biosynthetic protein {ECO:0000313|EMBL:KCV81266.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibact
class I and II aminotransferase
BD02T64_scaffold_415_8
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6902..7729)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WPI4_RHOS5 rbh
Biphenyl 2,3-dioxygenase {ECO:0000313|EMBL:KEP68151.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianen
hypothetical protein
BD02T64_scaffold_415_9
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7726..8076)
DNA (351bp) protein (117aa)
phosphoglycerate mutase (EC:5.4.2.-)
Phosphoglycerate mutase n=1 Tax=Rhodobacter capsulatus B6 RepID=V8GKQ8_RHOCA rbh
Phosphoglycerate mutase {ECO:0000313|EMBL:KCV81269.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium a
BD02T64_scaffold_415_10
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8420..8863
DNA (444bp) protein (148aa)
Bifunctional adenosylcobalamin biosynthesis protein CobP {ECO:0000313|EMBL:EEX12642.1}; EC=2.7.1.156 {ECO:0000313|EMBL:EEX12642.1};; EC=2.7.7.62 {ECO:0000313|EMBL:EEX12642.1};; TaxID=501479 species="B
cobP; bifunctional cobinamide kinase/cobinamide phosphate guanyltransferase CobP (EC:2.7.1.156 2.7.7.62)
Bifunctional adenosylcobalamin biosynthesis protein CobP n=1 Tax=Citreicella sp. SE45 RepID=D0D9A3_9RHOB rbh
BD02T64_scaffold_415_11
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8864..9889
DNA (1026bp) protein (342aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.2
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SER2_9RHOB
BD02T64_scaffold_415_12
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9886..10659
DNA (774bp) protein (258aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
cobV; cobalamin 5'-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SER3_9RHOB
BD02T64_scaffold_415_13

Not on your lists

10841..11332
DNA (492bp) protein (164aa)
AsnC family transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EK80_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM86608.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator
BD02T64_scaffold_415_14
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11450..12820
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X3V1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KHD12124.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
aminotransferase
BD02T64_scaffold_415_15
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12893..14035
DNA (1143bp) protein (381aa)
Amidohydrolase subfamily n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QTE0_9RHOB rbh
Amidohydrolase subfamily {ECO:0000313|EMBL:EEE44311.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandri
amidohydrolase
BD02T64_scaffold_415_16
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14433..15275
DNA (843bp) protein (281aa)
50S ribosomal protein L2 n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D6V3_9RHOB
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium.;" source="Thalassobium
rplB; 50S ribosomal protein L2
BD02T64_scaffold_415_17
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15279..15557
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=2 Tax=Roseobacter RepID=RS19_ROSDO rbh
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitoba
rpsS; 30S ribosomal protein S19
BD02T64_scaffold_415_18
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15563..15943
DNA (381bp) protein (127aa)
50S ribosomal protein L22 n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDN8_9RHOB
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tha
50S ribosomal protein L22
BD02T64_scaffold_415_19
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15943..16650
DNA (708bp) protein (236aa)
30S ribosomal protein S3 n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D6V6_9RHOB
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp
SSU ribosomal protein S3P
BD02T64_scaffold_415_20

Not on your lists


16663..17076
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=2 Tax=Sulfitobacter RepID=A3S848_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN88020.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rplP; 50S ribosomal protein L16
BD02T64_scaffold_415_21
unknown

Not on your lists

comp(17143..17544)
DNA (402bp) protein (134aa)

This feature has no annotations

BD02T64_scaffold_415_22
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17756..18376)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Ruegeria pomeroyi RepID=Q5LW52_RUEPO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV93808.2}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
BD02T64_scaffold_415_23
unknown

Not on your lists

comp(18434..18592)
DNA (159bp) protein (53aa)

This feature has no annotations

BD02T64_scaffold_415_24
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18852..19058
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AVI0_9RHOB rbh
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacteriu
LSU ribosomal protein L29p (L35e)
BD02T64_scaffold_415_25
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19073..19303
DNA (231bp) protein (77aa)
30S ribosomal protein S17 n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VFC7_9RHOB rbh
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimib
30S ribosomal protein S17
BD02T64_scaffold_415_26
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19385..19753
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=9 Tax=Rhodobacterales RepID=RL14_RUEPO
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phae
BD02T64_scaffold_415_27
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19755..20060
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0003003676 rbh
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacte
BD02T64_scaffold_415_28
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20060..20620
DNA (561bp) protein (187aa)
50S ribosomal protein L5 n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JN35_9RHOB rbh
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomari
BD02T64_scaffold_415_29
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20640..20945
DNA (306bp) protein (102aa)
UPI0003D6AEE7 related cluster n=1 Tax=unknown RepID=UPI0003D6AEE7
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. A
BD02T64_scaffold_415_30
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20958..21350
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Citreicella sp. SE45 RepID=D0D5B8_9RHOB rbh
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella s
rpsH; 30S ribosomal protein S8
Displaying items 1-30 of 81 in total

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