ggKbase home page

BD02T64_scaffold_2391

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2391_1
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..425)
DNA (423bp) protein (141aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RLMN_COLP3
ribosomal RNA large subunit methyltransferase N
BD02T64_scaffold_2391_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(628..1059)
DNA (432bp) protein (144aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=NDK_COLP3
BD02T64_scaffold_2391_3
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1224..1466)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE41947.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
BD02T64_scaffold_2391_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1523..3208)
DNA (1686bp) protein (562aa)
NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619}; Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};; EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};; TaxID=28229 species="Bacteria; Proteobact
sfcA; malate dehydrogenase (EC:1.1.1.38)
NAD-dependent malic enzyme n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=MAO1_COLP3
BD02T64_scaffold_2391_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3409..3621)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003825737
Uncharacterized protein {ECO:0000313|EMBL:KGK00662.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_2391_6
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3789..5336)
DNA (1548bp) protein (516aa)
Aminotransferase class V n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7R617_KANKD rbh
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ACV25448.1}; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreens
BD02T64_scaffold_2391_7
Marinomonas posidonica, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5416..5886)
DNA (471bp) protein (157aa)
Transcriptional regulator, AsnC family n=1 Tax=Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181) RepID=F6CW76_MARPP
AsnC family ranscriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AEF55437.1}; TaxID=491952 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas posidon
BD02T64_scaffold_2391_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6137..8332)
DNA (2196bp) protein (732aa)
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:KGJ95453.1}; EC=3.4.15.5 {ECO:0000313|EMBL:KGJ95453.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae;
dcp; peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Peptidyl-dipeptidase Dcp n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WA5_COLP3
BD02T64_scaffold_2391_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8745..9065)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WA4_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ26967.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_2391_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9459..10967
DNA (1509bp) protein (503aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003781B23
sensor histidine kinase
BD02T64_scaffold_2391_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10967..11482
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WA1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ95450.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein
BD02T64_scaffold_2391_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11469..12833
DNA (1365bp) protein (455aa)
Sigma-54 dependent response regulator n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WA0_COLP3
Putative two component, sigma54 specific, transcriptional regulator {ECO:0000313|EMBL:KGJ95449.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; C
sigma-54 dependent response regulator
BD02T64_scaffold_2391_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13464..14666
DNA (1203bp) protein (401aa)
membrane protein n=1 Tax=Colwellia piezophila RepID=UPI000371FB1E
NnrS family protein {ECO:0000313|EMBL:KGJ90674.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (V
hypothetical protein
BD02T64_scaffold_2391_14
Marinobacter salarius, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14831..15601)
DNA (771bp) protein (257aa)
Cobyric acid synthase n=1 Tax=Marinobacter sp. ES-1 RepID=U7FX39_9ALTE rbh
cobyric acid synthase
Cobyric acid synthase {ECO:0000313|EMBL:AHI32244.1}; TaxID=1420917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter salar
BD02T64_scaffold_2391_15
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15817..17169)
DNA (1353bp) protein (451aa)
Putative oxidoreductase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485R2_COLP3
Oxidoreductase {ECO:0000313|EMBL:KJE44943.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
oxidoreductase
BD02T64_scaffold_2391_16
Pseudoalteromonas tunicata, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17276..18454
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CF40_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR26715.1}; TaxID=87626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoa
Ig domain-containing protein group 1 domain-containing protein
Displaying 16 items

View Taxonomy