ggKbase home page

cg_0.2_sub10_scaffold_410_c

Search features with annotation key words

Displaying 30 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_410_c_1
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(138..1106)
DNA (969bp) protein (323aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=CG_GN02-01
RluA family pseudouridine synthase (EC:3.2.1.17); K06180 ribosomal large subunit pseudouridine synthase D [EC:5.4.99.12] id=123882 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
RluA family pseudouridine synthase
cg_0.2_sub10_scaffold_410_c_2
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(1133..1279)
DNA (147bp) protein (49aa)
transmembrane_regions 12..31 id=124578 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
transmembrane_regions 12..31 Tax=ACD78
cg_0.2_sub10_scaffold_410_c_3
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(1442..1999)
DNA (558bp) protein (186aa)
transmembrane_regions 12..31 Tax=CG_GN02-01
transmembrane_regions 12..31 id=124578 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_410_c_4
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(2084..2305)
DNA (222bp) protein (74aa)
seg 21..37 Tax=CG_GN02-02
seg 21..37 id=124579 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_410_c_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(2867..3154)
DNA (288bp) protein (96aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YNR9_9BACT rbh
Uncharacterized protein (Fragment) Tax=CG_GN02-01
cg_0.2_sub10_scaffold_410_c_6

Not on your lists

comp(3175..3414)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z5X3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD44601.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
cg_0.2_sub10_scaffold_410_c_7
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

3568..4188
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z533_9BACT rbh
Uncharacterized protein Tax=CG_GN02-01
cg_0.2_sub10_scaffold_410_c_8
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

4265..4540
DNA (276bp) protein (92aa)
Sigma-70 region 4 protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZJL4_9BACT
Sigma-70 region 4 protein (Fragment) Tax=CG_GN02-01
cg_0.2_sub10_scaffold_410_c_9
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

4544..5317
DNA (774bp) protein (258aa)
Sigma-70 region 4 protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZJL4_9BACT rbh
hypothetical protein Tax=CG_GN02-01
hypothetical protein
cg_0.2_sub10_scaffold_410_c_10
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5497..6243)
DNA (747bp) protein (249aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XHC6_9BACT rbh
ATPase; K07391 magnesium chelatase family protein Tax=CG_GN02-01
ATPase
cg_0.2_sub10_scaffold_410_c_11
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6451..7023)
DNA (573bp) protein (191aa)
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=CG_GN02-01
aar:Acear_1656 Mg chelatase, subunit ChlI; K07391 magnesium chelatase family protein id=124197 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Mg chelatase subunit ChlI
cg_0.2_sub10_scaffold_410_c_12
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

7237..8028
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT id=69622 bin=ACD49 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Putative uncharacterized protein Tax=CG_GN02-01
cg_0.2_sub10_scaffold_410_c_13
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

8047..8931
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT id=34322 bin=ACD2 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Putative uncharacterized protein Tax=CG_GN02-01
cg_0.2_sub10_scaffold_410_c_14
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

8956..10146
DNA (1191bp) protein (397aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XGC2_9BACT rbh
hypothetical protein Tax=CG_GN02-01
hypothetical protein
cg_0.2_sub10_scaffold_410_c_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

10219..11061
DNA (843bp) protein (281aa)
transmembrane_regions 5..22 Tax=CG_GN02-01
transmembrane_regions 5..22 id=124805 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_410_c_16
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

11178..11432
DNA (255bp) protein (85aa)
DNA repair protein radA (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XW21_9BACT
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=CG_GN02-01
DNA repair protein RadA
cg_0.2_sub10_scaffold_410_c_17
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

11619..12599
DNA (981bp) protein (327aa)
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=CG_GN02-01
bpb:bpr_I0875 radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms id=124807 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DNA repair protein RadA
cg_0.2_sub10_scaffold_410_c_18
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


12596..12955
DNA (360bp) protein (120aa)
50S ribosomal protein L31 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZJ26_9BACT rbh
50S ribosomal protein L31 Tax=CG_GN02-01
50S ribosomal protein L31
cg_0.2_sub10_scaffold_410_c_19
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

13079..13312
DNA (234bp) protein (78aa)
serine phosphatase RsbU Tax=CG_GN02-01
serine phosphatase RsbU id=123668 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_410_c_20
ACD78, Gracilibacteria, Bacteria

Not on your lists

13334..13546
DNA (213bp) protein (71aa)
serine phosphatase RsbU id=123668 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
serine phosphatase RsbU Tax=ACD78
cg_0.2_sub10_scaffold_410_c_21
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

13634..14242
DNA (609bp) protein (203aa)
protein serine/threonine phosphatase; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase) Tax=CG_GN02-02
protein serine/threonine phosphatase; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase) id=69631 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
phosphoserine phosphatase
cg_0.2_sub10_scaffold_410_c_22
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

14523..15419
DNA (897bp) protein (299aa)
Type IV secretory pathway VirB4 components-like protein Tax=CG_GN02-01
fre:Franean1_2548 type IV secretory pathway VirB4 protein-like protein id=69628 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
hypothetical protein
cg_0.2_sub10_scaffold_410_c_23
ACD78, Gracilibacteria, Bacteria

Not on your lists

15435..15917
DNA (483bp) protein (161aa)
fre:Franean1_2548 type IV secretory pathway VirB4 protein-like protein Tax=ACD78
fre:Franean1_2548 type IV secretory pathway VirB4 protein-like protein id=124203 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
cg_0.2_sub10_scaffold_410_c_24
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

15924..16406
DNA (483bp) protein (161aa)
Type IV secretory pathway VirB4 components-like protein Tax=CG_GN02-01
fre:Franean1_2548 type IV secretory pathway VirB4 protein-like protein id=124203 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Type IV secretory pathway VirB4 components-like protein
cg_0.2_sub10_scaffold_410_c_25
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

17066..17272
DNA (207bp) protein (69aa)
Putative RNA-binding protein n=1 Tax=bacterium S5 RepID=D3BYS4_9BACT id=124199 bin=ACD78 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
hypothetical protein Tax=CG_GN02-01
hypothetical protein
cg_0.2_sub10_scaffold_410_c_26
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(17310..17831)
DNA (522bp) protein (174aa)
transmembrane_regions 17..39 Tax=CG_GN02-01
transmembrane_regions 17..39 id=124202 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_410_c_27
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(17897..18505)
DNA (609bp) protein (203aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=CG_GN02-01
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ73_CLOAI id=124013 bin=ACD78 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_410_c_28
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(18644..19015)
DNA (372bp) protein (124aa)
Tryptophanyl-tRNA synthetase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ73_CLOAI id=124013 bin=ACD78 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
tryptophanyl-tRNA synthetase Tax=CG_GN02-01
tryptophanyl-tRNA synthetase
cg_0.2_sub10_scaffold_410_c_29
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(19227..21434)
DNA (2208bp) protein (736aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=CG_GN02-01
rsd:TGRD_674 DNA topoisomerase I ; K03168 DNA topoisomerase I [EC:5.99.1.2] id=68905 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DNA topoisomerase I
cg_0.2_sub10_scaffold_410_c_30
unknown

Not on your lists

21961..22062
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 30 items

View Taxonomy