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cg_0.2_sub10_scaffold_432_c

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_432_c_1
ACD78, Gracilibacteria, Bacteria

Not on your lists

214..432
DNA (219bp) protein (73aa)
coiled-coil 6..27 id=123820 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
coiled-coil 6..27 Tax=ACD78
cg_0.2_sub10_scaffold_432_c_2
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(704..847)
DNA (144bp) protein (48aa)
hypothetical protein Tax=CG_GN02-01
hypothetical protein id=123825 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_432_c_3
ACD78, Gracilibacteria, Bacteria

Not on your lists

1017..1112
DNA (96bp) protein (32aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] id=123827 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=ACD78
cg_0.2_sub10_scaffold_432_c_4
ACD78, Gracilibacteria, Bacteria

Not on your lists

1146..1307
DNA (162bp) protein (54aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=ACD78
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] id=123827 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_432_c_5

Not on your lists

1338..1496
DNA (159bp) protein (53aa)
Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] id=123827 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_432_c_6
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

1539..1775
DNA (237bp) protein (79aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_432_c_7
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

1872..2714
DNA (843bp) protein (281aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_GN02-01
alanyl-tRNA synthetase (EC:6.1.1.7)
cg_0.2_sub10_scaffold_432_c_8
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

2784..2954
DNA (171bp) protein (57aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_GN02-02
tde:TDE1659 alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=69194 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_432_c_9
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

2988..3737
DNA (750bp) protein (250aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_GN02-01
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BUU4_9BACT
hypothetical protein
cg_0.2_sub10_scaffold_432_c_10
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

3792..3911
DNA (120bp) protein (40aa)
putative transcriptional regulator, Crp/Fnr family Tax=CG_GN02-01
putative transcriptional regulator, Crp/Fnr family id=124173 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_432_c_11
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

3936..4202
DNA (267bp) protein (89aa)
putative transcriptional regulator, Crp/Fnr family Tax=CG_GN02-01
putative transcriptional regulator, Crp/Fnr family id=124173 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_432_c_12
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

4322..4582
DNA (261bp) protein (87aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=CG_GN02-01
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=124177 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
translation initiation factor IF-1
cg_0.2_sub10_scaffold_432_c_13
Campylobacter jejuni, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4629..4745
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=113 Tax=Campylobacter RepID=RL36_CAMJ8 rbh
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=32022 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae;
cg_0.2_sub10_scaffold_432_c_14
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


4845..5210
DNA (366bp) protein (122aa)
rpsM; 30S ribosomal protein S13 Tax=CG_GN02-01
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=124178 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
rpsM; 30S ribosomal protein S13
cg_0.2_sub10_scaffold_432_c_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


5369..5758
DNA (390bp) protein (130aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_GN02-01
rpsK; 30S ribosomal protein S11 id=124179 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
30S ribosomal protein S11
cg_0.2_sub10_scaffold_432_c_16
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


5788..6414
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XYV4_9BACT rbh
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_GN02-01
rpsD; 30S ribosomal protein S4
cg_0.2_sub10_scaffold_432_c_17
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

6469..7449
DNA (981bp) protein (327aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=124181 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DNA-directed RNA polymerase, alpha subunit Tax=CG_GN02-01
DNA-directed RNA polymerase, alpha subunit
cg_0.2_sub10_scaffold_432_c_18
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


7497..7868
DNA (372bp) protein (124aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=CG_GN02-01
ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=124182 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
50S ribosomal protein L17
cg_0.2_sub10_scaffold_432_c_19
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


7895..8326
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YXM8_9BACT rbh
rplM; 50S ribosomal protein L13 Tax=CG_GN02-01
rplM; 50S ribosomal protein L13
cg_0.2_sub10_scaffold_432_c_20
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


8370..8765
DNA (396bp) protein (132aa)
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_GN02-01
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=124174 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
rpsI; 30S ribosomal protein S9
cg_0.2_sub10_scaffold_432_c_21
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


8801..9220
DNA (420bp) protein (140aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=CG_GN02-01
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=123468 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
rpsL; 30S ribosomal protein S12
cg_0.2_sub10_scaffold_432_c_22
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


9293..9748
DNA (456bp) protein (152aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=CG_GN02-01
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=124175 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
30S ribosomal protein S7
cg_0.2_sub10_scaffold_432_c_23
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


9870..10151
DNA (282bp) protein (94aa)
50S ribosomal protein L27 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCG4_9BACT id=124176 bin=ACD78 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
ribosomal protein L27 Tax=CG_GN02-01
50S ribosomal protein L27
cg_0.2_sub10_scaffold_432_c_24
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

10339..10524
DNA (186bp) protein (62aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XIH1_9BACT rbh
Uncharacterized protein (Fragment) Tax=CG_GN02-01
cg_0.2_sub10_scaffold_432_c_25
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

10967..11479
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZI57_9BACT rbh
Uncharacterized protein Tax=CG_GN02-01
cg_0.2_sub10_scaffold_432_c_26
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

11492..11653
DNA (162bp) protein (54aa)
Uncharacterized protein Tax=CG_GN02-02
seg 64..78 id=123624 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_432_c_27
unknown

Not on your lists

11703..12047
DNA (345bp) protein (115aa)

This feature has no annotations

cg_0.2_sub10_scaffold_432_c_28
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(12013..12129)
DNA (117bp) protein (39aa)
sortase family protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20CB id=123629 bin=ACD78 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
putative sortase Tax=CG_GN02-02
cg_0.2_sub10_scaffold_432_c_29
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(12394..13023)
DNA (630bp) protein (210aa)
sortase family protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20CB id=123629 bin=ACD78 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
sortase family protein Tax=CG_GN02-01
cg_0.2_sub10_scaffold_432_c_30
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(13113..14291)
DNA (1179bp) protein (393aa)
seg 184..196 Tax=CG_GN02-01
seg 184..196 id=123628 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Displaying items 1-30 of 40 in total

View Taxonomy