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BD02T64_scaffold_38

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Displaying items 1-30 of 298 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_38_1
unknown

Not on your lists

1..1203
DNA (1203bp) protein (401aa)

This feature has no annotations

BD02T64_scaffold_38_2
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(1234..6717)
DNA (5484bp) protein (1828aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BUE0_9BACT rbh
putative secreted protein Tax=ACD2
4-methyl-5-thiazole monophosphate biosynthesis enzyme
BD02T64_scaffold_38_3
ACD49, Gracilibacteria, Bacteria

Not on your lists

6957..7403
DNA (447bp) protein (149aa)
single-strand binding protein; K03111 single-strand DNA-binding protein id=69632 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=ACD49
single-strand binding protein
BD02T64_scaffold_38_4

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comp(7477..9651)
DNA (2175bp) protein (725aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5R8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26426.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
PKD domain-containing protein
This and next three proteins are involved in Type II secretion. See notes. Jill Banfield (8/1/16)
BD02T64_scaffold_38_5

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comp(9848..12049)
DNA (2202bp) protein (734aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5R8_9BACT
Marine sediment metagenome DNA, contig: S03H2_L02691 {ECO:0000313|EMBL:GAH47169.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
putative heme-binding lipoprotein
no heme-binding motifs in alt prediction: part of Type II secretion system related Jill Banfield (8/1/16)
BD02T64_scaffold_38_6
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(12143..13705)
DNA (1563bp) protein (521aa)
TIR protein id=50837 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
TIR protein Tax=ACD3
BD02T64_scaffold_38_7

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comp(13736..15925)
DNA (2190bp) protein (730aa)
Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1DDD8_EMIHU rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE26426.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
PKD domain-containing protein
BD02T64_scaffold_38_8

Not on your lists

16148..17254
DNA (1107bp) protein (369aa)
Chaperone protein DnaJ n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F9H7_9BACT rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
dnaJ; chaperone protein
BD02T64_scaffold_38_9
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

17295..18359
DNA (1065bp) protein (355aa)
hypothetical protein id=33892 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
hypothetical protein Tax=CG_GN02-01
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
BD02T64_scaffold_38_10
unknown

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18425..21274
DNA (2850bp) protein (950aa)

This feature has no annotations

BD02T64_scaffold_38_11
unknown

Not on your lists

21278..21502
DNA (225bp) protein (75aa)

This feature has no annotations

BD02T64_scaffold_38_12
ACD2, Gracilibacteria, Bacteria

Not on your lists

21519..23198
DNA (1680bp) protein (560aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=ACD2
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GG23_9BACT rbh
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
Has pyruvate/ketoisovalerate oxidoreductase domain (PFOR domain), thiamin disphosphate binidng fold, and PFOR N-terminal domain based on interpro Jill Banfield (4/8/16)
BD02T64_scaffold_38_13
ACD3, Gracilibacteria, Bacteria

Not on your lists

23203..23805
DNA (603bp) protein (201aa)
Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily - domain
pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=ACD3
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FCK4_9BACT rbh
hypothetical protein
BD02T64_scaffold_38_14
unknown

Not on your lists

comp(23811..24095)
DNA (285bp) protein (95aa)

This feature has no annotations

BD02T64_scaffold_38_15
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(24111..24770)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVM7_9BACT rbh
tetrapyrrole (corrin-porphyrin) methylase family protein UPF0011; K07056 Tax=ACD49
tetrapyrrole methylase
BD02T64_scaffold_38_16
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

24899..25519
DNA (621bp) protein (207aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_41_13b_curated
BD02T64_scaffold_38_17
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(25583..26356)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BDI2_9BACT rbh
seg 5..22 Tax=ACD49
BD02T64_scaffold_38_18
unknown

Not on your lists

26556..27551
DNA (996bp) protein (332aa)
Primosomal protein N' n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDC1_ACIJO id=69529 bin=ACD49 species=Acinetobacter johnsonii genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Primosomal protein N' n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDC1_ACIJO Tax=ACD49
priA; primosome assembly protein PriA
BD02T64_scaffold_38_19
ACD2, Gracilibacteria, Bacteria

Not on your lists

27655..28785
DNA (1131bp) protein (377aa)
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=ACD2
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G780_9BACT rbh
BD02T64_scaffold_38_20
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

28825..29334
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AVB5_9BACT rbh
hypothetical protein Tax=CG_GN02-01
BD02T64_scaffold_38_21

Not on your lists

29347..30534
DNA (1188bp) protein (396aa)
Cell division protein (Septum formation) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F596_9BACT rbh
Cell division protein (Septum formation); TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
BD02T64_scaffold_38_22
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(30572..31282)
DNA (711bp) protein (237aa)
ABC transporter ATPase (EC:3.6.3.-); K01990 ABC-2 type transport system ATP-binding protein id=69085 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
multidrug ABC transporter ATPase Tax=CG_GN02-02
multidrug ABC transporter ATPase
BD02T64_scaffold_38_23
ACD3, Gracilibacteria, Bacteria

Not on your lists

31415..31960
DNA (546bp) protein (182aa)
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=ACD3
frr; ribosome recycling factor; K02838 ribosome recycling factor id=35068 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
ribosome recycling factor
BD02T64_scaffold_38_24
ACD78, Gracilibacteria, Bacteria

Not on your lists

32037..32219
DNA (183bp) protein (61aa)
Ribosomal_L33 12..52 Tax=ACD78
Ribosomal_L33 12..52 id=49837 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
BD02T64_scaffold_38_25
unknown

Not on your lists

32267..32683
DNA (417bp) protein (139aa)

This feature has no annotations

BD02T64_scaffold_38_26
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(32697..33467)
DNA (771bp) protein (257aa)
hypothetical protein id=50188 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
hypothetical protein Tax=ACD3
hypothetical protein
BD02T64_scaffold_38_27
unknown

Not on your lists

comp(33532..34887)
DNA (1356bp) protein (452aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-]
Peptidase U32 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QZC4_9FIRM id=69323 bin=ACD49 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Peptidase U32 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QZC4_9FIRM Tax=ACD49
BD02T64_scaffold_38_28
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(34986..35186)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2H0T1_9BACT rbh
hypothetical protein Tax=ACD2
BD02T64_scaffold_38_29
ACD4, Gracilibacteria, Bacteria

Not on your lists

35337..35675
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FY27_9BACT rbh
RBFA 10..101 Tax=ACD4
BD02T64_scaffold_38_30
ACD4, Gracilibacteria, Bacteria

Not on your lists

35617..36633
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F6S5_9BACT rbh
transmembrane_regions 73..95 Tax=ACD4
Displaying items 1-30 of 298 in total

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