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ar4r2_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_36_1

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26..1405
DNA (1380bp) protein (460aa)
lba:Lebu_0493 FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB id=123848 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD30234.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
FeS assembly protein SufB
ar4r2_scaffold_36_2
unknown

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1425..1811
DNA (387bp) protein (129aa)

This feature has no annotations

ar4r2_scaffold_36_3

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1811..2494
DNA (684bp) protein (228aa)
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD id=123847 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD30236.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ynhC; hypothetical protein
ar4r2_scaffold_36_4
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

2569..3123
DNA (555bp) protein (185aa)
cytochrome c biogenesis protein transmembrane region id=132720 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
cytochrome c biogenesis transmembrane protein
Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
ar4r2_scaffold_36_5

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3125..3910
DNA (786bp) protein (262aa)
UPI0003CFF956 related cluster n=1 Tax=unknown RepID=UPI0003CFF956 rbh
Cytochrome c biogenesis protein
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EKD25077.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_36_6
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

3915..4316
DNA (402bp) protein (134aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XI42_9BACT
SUF system FeS assembly protein, NifU family
Tax=CG_GN02-02
ar4r2_scaffold_36_7
GWE2_Clostridiales_32_10_curated, Clostridiales, Bacteria

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4320..4724
DNA (405bp) protein (135aa)
Putative transcriptional regulator id=1797153 bin=GWE2_Clostridiales_32_10 species=Clostridium ljungdahlii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
aau; protein Aau
Tax=GWE2_Clostridiales_32_10_curated
ar4r2_scaffold_36_8

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comp(4746..5426)
DNA (681bp) protein (227aa)
rplA; ribosomal protein L1; K02863 large subunit ribosomal protein L1 id=34219 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rplA; 50S ribosomal protein L1
ar4r2_scaffold_36_9

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comp(5524..5826)
DNA (303bp) protein (101aa)
protein of unknown function DUF37; K08998 hypothetical protein id=124662 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ytjA; hypothetical protein
ar4r2_scaffold_36_10
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


comp(5872..6216)
DNA (345bp) protein (115aa)
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 id=124884 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
50S ribosomal protein L20
Tax=CG_GN02-01
ar4r2_scaffold_36_11

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comp(6257..6451)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FXT8_9BACT
50S ribosomal protein L35 {ECO:0000256|RuleBase:RU000568}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_36_12

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comp(6477..6989)
DNA (513bp) protein (171aa)
bacterial translation initiation factor 3 (bif-3); K02520 translation initiation factor IF-3 id=124875 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD30579.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
infC; translation initiation factor IF-3
ar4r2_scaffold_36_13

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comp(7009..7308)
DNA (300bp) protein (100aa)
30S ribosomal protein S20 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G7K7_9BACT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_36_14
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(7483..8922)
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000360D1D6 rbh
Na+/solute symporter rbh
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
ar4r2_scaffold_36_15
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9039..11408)
DNA (2370bp) protein (790aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=uncultured bacterium RepID=K2EAG1_9BACT rbh
pheT; phenylalanyl-tRNA synthetase subunit beta rbh
Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ar4r2_scaffold_36_16

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11535..12260
DNA (726bp) protein (242aa)
HD-domain/PDEase-like id=34749 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE29777.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_36_17

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comp(12283..13269)
DNA (987bp) protein (329aa)
zmo:ZMO1166 recA; recombinase A (EC:3.6.3.8); K03553 recombination protein RecA id=123676 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
recA; multifunctional SOS repair factor rbh
ar4r2_scaffold_36_18
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(13352..13582)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YVQ4_9BACT
Tax=CG_GN02-01
ar4r2_scaffold_36_19
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(13599..14207)
DNA (609bp) protein (203aa)
exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=123326 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Exonuclease RNase T and DNA polymerase III
Tax=CG_GN02-01
ar4r2_scaffold_36_20
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(14335..15384)
DNA (1050bp) protein (350aa)
RNA polymerase sigma factor n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G294_9BACT rbh
hypothetical protein
Tax=CG_GN02-02
ar4r2_scaffold_36_21

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comp(15457..16029)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G556_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE29437.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_36_22

Not on your lists

16374..17528
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD30301.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_36_23
ACD78, Gracilibacteria, Bacteria

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17534..18424
DNA (891bp) protein (297aa)
transmembrane_regions 12..31 id=124578 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=ACD78
ar4r2_scaffold_36_24

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18462..19484
DNA (1023bp) protein (341aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Pseudouridine synthase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AVI7_9BACT rbh
RluA family pseudouridine synthase
ar4r2_scaffold_36_25

Not on your lists

19552..20694
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2H287_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE29960.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hydrolase of HD superfamily-like protein
ar4r2_scaffold_36_26
RIFOXYC2_FULL_OD1_Nomurabacteria_36_19_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20701..21435
DNA (735bp) protein (245aa)
Methyltransferase type 12 n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BJP8_THEXL
methyltransferase type 12
Tax=RIFOXYC2_FULL_OD1_Nomurabacteria_36_19_curated
ar4r2_scaffold_36_27
Arcobacter sp. L, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21443..21949)
DNA (507bp) protein (169aa)
Phosphohistidine phosphatase n=1 Tax=Arcobacter sp. L RepID=G2HW41_9PROT
phosphohistidine phosphatase
Phosphohistidine phosphatase {ECO:0000313|EMBL:BAK73344.1}; TaxID=944547 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter sp. L.;"
ar4r2_scaffold_36_28
unknown

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22075..22347
DNA (273bp) protein (91aa)

This feature has no annotations

ar4r2_scaffold_36_29

Not on your lists

22351..22860
DNA (510bp) protein (170aa)
putative regulatory protein id=68782 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66065.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
aminoacyl-tRNA editing domain protein
ar4r2_scaffold_36_30

Not on your lists

22878..24236
DNA (1359bp) protein (453aa)
hypothetical protein id=34722 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE29829.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
Displaying items 1-30 of 122 in total

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