ggKbase home page

ar4r2_scaffold_2471

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2471_1
GWF2_OD1_41_16, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

52..480
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR96693.1}; TaxID=1618997 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_41_16.;"
Putative uncharacterized protein id=2598226 bin=GWC1_OD1_38_17 species=unknown genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
ar4r2_scaffold_2471_2

Not on your lists

485..1204
DNA (720bp) protein (240aa)
Hemolysin A n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QG13_9RHIZ id=49696 bin=ACD3 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Hemolysin A {ECO:0000313|EMBL:EKE27853.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hemolysin A
ar4r2_scaffold_2471_3

Not on your lists

comp(1563..2645)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FBG0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE28466.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_2471_4

Not on your lists

2783..4252
DNA (1470bp) protein (490aa)
trmA; TrmA; K00599 [EC:2.1.1.-] id=123958 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
TrmA {ECO:0000313|EMBL:EKD29426.1}; EC=2.1.1.- {ECO:0000313|EMBL:EKD29426.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
RNA methyltransferase rbh
ar4r2_scaffold_2471_5
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

4325..5416
DNA (1092bp) protein (364aa)
Twitching motility protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ23_9FIRM id=69019 bin=ACD49 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Tfp pilus assembly protein, pilus retraction ATPase PilT rbh
Tax=CG_GN02-02
ar4r2_scaffold_2471_6
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

Not on your lists

5434..6291
DNA (858bp) protein (286aa)
Cation channel family protein n=1 Tax=Tetrahymena thermophila (strain SB210) RepID=Q23EB2_TETTS
Cation channel family protein {ECO:0000313|EMBL:EAR94841.2}; TaxID=312017 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;"
ar4r2_scaffold_2471_7
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(6298..7254)
DNA (957bp) protein (319aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] id=5095495 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
Primosomal protein N', primosomal protein N {ECO:0000313|EMBL:KKQ69320.1}; EC=3.6.4.- {ECO:0000313|EMBL:KKQ69320.1};; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
primosome assembly protein PriA
ar4r2_scaffold_2471_8

Not on your lists

comp(7261..8691)
DNA (1431bp) protein (477aa)
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37DC8 id=124456 bin=ACD78 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:EKD30537.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_2471_9

Not on your lists

comp(8702..10018)
DNA (1317bp) protein (439aa)
UDP-N-acetylmuramyl-tripeptide synthetase; K01928 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=124210 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD29957.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase
Displaying 9 items

View Taxonomy