ggKbase home page

ar4r2_scaffold_330

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_330_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

206..1468
DNA (1263bp) protein (421aa)
transmembrane_regions 7..29 id=50646 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=ACD3
ar4r2_scaffold_330_2
unknown

Not on your lists

1563..1763
DNA (201bp) protein (67aa)

This feature has no annotations

ar4r2_scaffold_330_3
unknown

Not on your lists

1753..2043
DNA (291bp) protein (97aa)

This feature has no annotations

ar4r2_scaffold_330_4

Not on your lists

comp(2045..2875)
DNA (831bp) protein (277aa)
seg 15..32 id=123289 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD30420.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_330_5
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(2972..4054)
DNA (1083bp) protein (361aa)
Twitching motility protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ23_9FIRM id=69019 bin=ACD49 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tfp pilus assembly protein, pilus retraction ATPase PilT rbh
Tax=CG_GN02-02
ar4r2_scaffold_330_6
unknown

Not on your lists

comp(4120..4239)
DNA (120bp) protein (40aa)

This feature has no annotations

ar4r2_scaffold_330_7
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(4499..6187)
DNA (1689bp) protein (563aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6HNV2_9FIRM
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
ar4r2_scaffold_330_8

Not on your lists

6351..7262
DNA (912bp) protein (304aa)
coiled-coil 264..285 id=34077 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE29196.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_330_9
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

7409..8758
DNA (1350bp) protein (450aa)
aar:Acear_2325 primary replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.1.-] id=69034 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
dnaB; replicative DNA helicase
Tax=CG_GN02-02
ar4r2_scaffold_330_10
unknown

Not on your lists

9296..9871
DNA (576bp) protein (192aa)

This feature has no annotations

ar4r2_scaffold_330_11
unknown

Not on your lists

9935..10639
DNA (705bp) protein (235aa)

This feature has no annotations

ar4r2_scaffold_330_12
unknown

Not on your lists

10662..10886
DNA (225bp) protein (75aa)

This feature has no annotations

ar4r2_scaffold_330_13
Basilea psittacipulmonis, Basilea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10958..11533)
DNA (576bp) protein (192aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1072685 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Basilea.;" source="Basilea psittacipulmonis DSM 24701.;"
Superoxide dismutase n=1 Tax=Enterobacteriaceae bacterium 9_2_54FAA RepID=E5YFK3_9ENTR
superoxide dismutase
ar4r2_scaffold_330_14
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

11668..13038
DNA (1371bp) protein (457aa)
probable transcription regulator id=123745 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cell envelope-related transcriptional attenuator
Tax=CG_GN02-02
ar4r2_scaffold_330_15
ACD78, Gracilibacteria, Bacteria

Not on your lists

13051..16260
DNA (3210bp) protein (1070aa)
putative penicillin-binding protein 1A id=123497 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Tax=ACD78
ar4r2_scaffold_330_16
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

16296..17729
DNA (1434bp) protein (478aa)
Pyruvate kinase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YBI9_9BACT rbh
hypothetical protein
Tax=CG_GN02-02
ar4r2_scaffold_330_trna_1
unknown

Not on your lists

17792..17873
DNA (82bp)
transferRNA Pseudo
ar4r2_scaffold_330_17

Not on your lists

17982..18413
DNA (432bp) protein (144aa)
MutT/NUDIX family protein n=1 Tax=uncultured bacterium RepID=K2BMD2_9BACT
MutT/NUDIX family protein {ECO:0000313|EMBL:EKD69938.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NUDIX hydrolase
ar4r2_scaffold_330_18
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(18431..19126)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Citrus clementina RepID=V4S7F8_9ROSI
metal-dependent hydrolase
Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
ar4r2_scaffold_330_19
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

Not on your lists

19230..19964
DNA (735bp) protein (245aa)
Transcriptional regulator, TrmB n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9V7_9BACT id=32185 bin=ACD28 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=Lentisphaeria phylum=Lentisphaerae tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
putative transcriptional regulator
Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
ar4r2_scaffold_330_20

Not on your lists

20033..21337
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XXL3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD29957.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase
ar4r2_scaffold_330_21
Mesoplasma florum, Mesoplasma, Entomoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

21362..22417
DNA (1056bp) protein (352aa)
Modification methylase HgaI-1 n=1 Tax=Mesoplasma florum W37 RepID=U5PD66_MESFO rbh
modification methylase HgaI-1 rbh
Modification methylase HgaI-1 {ECO:0000313|EMBL:AGY41395.1}; TaxID=1406864 species="Bacteria; Tenericutes; Mollicutes; Entomoplasmatales; Entomoplasmataceae; Mesoplasma.;" source="Mesoplasma florum W37.;"
ar4r2_scaffold_330_22
unknown

Not on your lists

22430..23356
DNA (927bp) protein (309aa)

This feature has no annotations

ar4r2_scaffold_330_23

Not on your lists

23367..24788
DNA (1422bp) protein (474aa)
dnaX; DNA polymerase III gamma and tau subunits (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BVW3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66404.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_330_24
RIFOXYC2_FULL_OD1_Yanofskybacteria_44_13_curated, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(24821..26668)
DNA (1848bp) protein (616aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase id=1924358 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria) rbh
Tax=RIFOXYC2_FULL_OD1_Yanofskybacteria_44_13_curated
ar4r2_scaffold_330_25

Not on your lists

26947..27690
DNA (744bp) protein (248aa)
HD-domain/PDEase-like id=34749 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE29777.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_330_26
unknown

Not on your lists

comp(27662..27817)
DNA (156bp) protein (52aa)

This feature has no annotations

ar4r2_scaffold_330_27
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27834..29294)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JSE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36851.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
ABC-type transport system involved in multi-copper enzyme maturation, permease component
ar4r2_scaffold_330_28
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29312..30118)
DNA (807bp) protein (269aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TWM8_9CLOT
ABC transporter {ECO:0000313|EMBL:KGR75235.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
ABC transporter ATP-binding protein
ar4r2_scaffold_330_29
unknown

Not on your lists

comp(30129..31631)
DNA (1503bp) protein (501aa)

This feature has no annotations

Displaying items 1-30 of 45 in total

View Taxonomy