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ar4r2_scaffold_550

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_550_1
CG_Bacteroid_02, Bacteroidetes, Bacteria

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1..792
DNA (792bp) protein (264aa)
Elongation factor Tu id=3642645 bin=GWF2_Bacteroidetes_41_31 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
elongation factor Tu
Tax=CG_Bacteroid_02
ar4r2_scaffold_550_trna_1
unknown

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872..944
DNA (73bp)
transferRNA Trp
ar4r2_scaffold_550_2
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

1198..1746
DNA (549bp) protein (183aa)
Transcription antitermination protein nusG id=3642644 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
antitermination protein NusG
Tax=CG_Bacteroid_02
ar4r2_scaffold_550_3

Not on your lists

2352..2720
DNA (369bp) protein (123aa)
protein of unknown function UPF0079; K06925 id=123897 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD30169.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_550_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(2736..3491)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EA85_9BACT
prolipoprotein diacylglyceryltransferase
Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ar4r2_scaffold_550_5

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comp(3503..4108)
DNA (606bp) protein (202aa)
isoprenylcysteine carboxyl methyltransferase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EC04
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:EKE06485.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
isoprenylcysteine carboxyl methyltransferase
Mevalonate pathway, protein modification Jill Banfield (11/8/16)
ar4r2_scaffold_550_6
unknown

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comp(4188..4544)
DNA (357bp) protein (119aa)

This feature has no annotations

ar4r2_scaffold_550_7
unknown

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comp(4586..4975)
DNA (390bp) protein (130aa)

This feature has no annotations

ar4r2_scaffold_550_8

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comp(4999..6348)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EL33_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE06484.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
radical SAM protein rbh
ar4r2_scaffold_550_9
unknown

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comp(6352..6615)
DNA (264bp) protein (88aa)

This feature has no annotations

ar4r2_scaffold_550_10

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comp(6637..8103)
DNA (1467bp) protein (489aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) id=69461 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Undecaprenyl-phosphate galactose phosphotransferase {ECO:0000313|EMBL:EKD66504.1}; EC=2.7.8.6 {ECO:0000313|EMBL:EKD66504.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_550_11

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8220..9623
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z467_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44342.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_550_12

Not on your lists

9640..10017
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AWG9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66046.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_550_13

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10130..12142
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BVD5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66159.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
lipoprotein
ar4r2_scaffold_550_14
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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12285..13070
DNA (786bp) protein (262aa)
VTC domain-containing protein n=1 Tax=Thauera sp. 28 RepID=N6Z8X6_9RHOO
VTC domain-containing protein
Tax=GWF2_Bacteroidetes_33_38_curated
ar4r2_scaffold_550_15

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comp(13143..14174)
DNA (1032bp) protein (344aa)
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase n=2 Tax=Clostridium butyricum RepID=B1QXC5_CLOBU id=68799 bin=ACD49 species=Clostridium butyricum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase {ECO:0000313|EMBL:EKD66178.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
ar4r2_scaffold_550_16

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comp(14202..14792)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F4F4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26001.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
membrane-associated phospholipid phosphatase
ar4r2_scaffold_550_17

Not on your lists

14924..16012
DNA (1089bp) protein (363aa)
hypothetical protein
pru:PRU_1445 hypothetical protein id=982929 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25341.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_550_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

16081..17907
DNA (1827bp) protein (609aa)
Two component regulator propeller domain protein id=4185436 bin=GWA2_Ignavibacteria-rel_35_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
two component regulator propeller domain-containing protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ar4r2_scaffold_550_19

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18065..20731
DNA (2667bp) protein (889aa)
cbk:CLL_A2505 valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=34266 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
ar4r2_scaffold_550_20
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

20813..21898
DNA (1086bp) protein (362aa)
Ribosome-binding ATPase YchF n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XXR5_9BACT rbh
ychF; GTP-dependent nucleic acid-binding protein EngD rbh
Tax=CG_GN02-01
ar4r2_scaffold_550_21
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

22064..26113
DNA (4050bp) protein (1350aa)
Domain: TIGR04330: cas_Cpf1 CRISPR-associated protein Cpf1, subtype PREFRAN
Uncharacterized protein n=1 Tax=Prevotella bryantii B14 RepID=D8E0G1_PREBR
Uncharacterized protein {ECO:0000313|EMBL:KKQ38174.1}; TaxID=1618481 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
hypothetical protein
ar4r2_scaffold_550_22
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

26192..26458
DNA (267bp) protein (89aa)
antitoxin StbD
Uncharacterized protein n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U1V8_SULKY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR33476.1}; TaxID=709032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
antitoxin StbD Jill Banfield (11/10/16)
ar4r2_scaffold_550_23
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

26467..26724
DNA (258bp) protein (86aa)
mRNA interferase RelE/StbE
RelE-like id=32029 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Uncharacterized protein {ECO:0000313|EMBL:KKT74453.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
mRNA interferase RelE/StbE Jill Banfield (11/10/16)
ar4r2_scaffold_550_24

Not on your lists

26797..27381
DNA (585bp) protein (195aa)
CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
hypothetical protein; K07464 putative RecB family exonuclease id=49808 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE28448.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_550_25

Not on your lists

27522..28484
DNA (963bp) protein (321aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
CRISPR-associated endonuclease Cas1 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G2G6_9BACT rbh
hypothetical protein
ar4r2_scaffold_550_26

Not on your lists

28613..28891
DNA (279bp) protein (93aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein id=49826 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
ar4r2_scaffold_550_27
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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28972..29940
DNA (969bp) protein (323aa)
ADP-ribosylglycohydrolase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN91_9FLAO
Crystallin {ECO:0000313|EMBL:KFE99440.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
ADP-ribosylglycohydrolase
CRISPR locus follows, repeat is GTTGAAAACATATAACAAATTTCTACTTTTGTAGAT end locus: 35239 bp Jill Banfield (11/10/16)
ar4r2_scaffold_550_28

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comp(35354..36823)
DNA (1470bp) protein (490aa)
ABC transporter (two domains)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AXH7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66471.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_550_29
unknown

Not on your lists

36992..37363
DNA (372bp) protein (124aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

View Taxonomy