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ar4r2_scaffold_1173

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1173_1
unknown

Not on your lists

comp(74..313)
DNA (240bp) protein (80aa)

This feature has no annotations

ar4r2_scaffold_1173_2
unknown

Not on your lists

comp(594..1601)
DNA (1008bp) protein (336aa)

This feature has no annotations

ar4r2_scaffold_1173_3

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1738..2562
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BDD5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66793.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNAse
ar4r2_scaffold_1173_4
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2488..3165)
DNA (678bp) protein (226aa)
Type I restriction enzyme EcoEI R protein n=1 Tax=Clostridium thermocellum BC1 RepID=U4MPY6_CLOTM
Type I restriction-modification system {ECO:0000313|EMBL:GAE88940.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
EcoEI R domain-containing protein
ar4r2_scaffold_1173_5
unknown

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comp(3855..4847)
DNA (993bp) protein (331aa)

This feature has no annotations

ar4r2_scaffold_1173_6
unknown

Not on your lists

4946..5368
DNA (423bp) protein (141aa)

This feature has no annotations

ar4r2_scaffold_1173_7

Not on your lists


comp(5415..6809)
DNA (1395bp) protein (465aa)
cth:Cthe_1312 glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] id=123588 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
glycyl-tRNA synthetase (EC:6.1.1.14)
ar4r2_scaffold_1173_8
GWE2_OD1_36_40, Moranbacteria, Parcubacteria, Bacteria

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comp(6972..7568)
DNA (597bp) protein (199aa)
Transposase n=1 Tax=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) RepID=B0TY31_FRAP2
Uncharacterized protein {ECO:0000313|EMBL:KKQ06967.1}; TaxID=1618713 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE2_36_40.;"
transposase IS200 like family protein
ar4r2_scaffold_1173_9
unknown

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comp(7561..8001)
DNA (441bp) protein (147aa)

This feature has no annotations

ar4r2_scaffold_1173_10

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comp(8034..8429)
DNA (396bp) protein (132aa)
hypothetical protein BoklE_31810 n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A7216 id=8608 bin=ACD15 species=Burkholderia oklahomensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE11484.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
endoribonuclease L-PSP family protein
HMM: 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]? Jill Banfield (11/10/16)
ar4r2_scaffold_1173_11

Not on your lists

comp(8557..8958)
DNA (402bp) protein (134aa)
UPI0003CFF470 related cluster n=1 Tax=unknown RepID=UPI0003CFF470
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD24532.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
mRNA interferase MazF [EC:3.1.-.-] Jill Banfield (11/10/16)
ar4r2_scaffold_1173_12
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9220..11061)
DNA (1842bp) protein (614aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037B2157
High affinity sulfate transporter {ECO:0000313|EMBL:EGW54685.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
sulfate transporter
ar4r2_scaffold_1173_13

Not on your lists

comp(11133..12140)
DNA (1008bp) protein (336aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=uncultured bacterium RepID=K2ET82_9BACT rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:KKR48001.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
cobyrinic acid ac-diamide synthase
chromosome partitioning protein ? Jill Banfield (11/10/16)
ar4r2_scaffold_1173_14
unknown

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comp(12332..13252)
DNA (921bp) protein (307aa)

This feature has no annotations

ar4r2_scaffold_1173_15

Not on your lists

comp(13288..14406)
DNA (1119bp) protein (373aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
tRNA-dihydrouridine synthase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FY65_9BACT
hypothetical protein
ar4r2_scaffold_1173_16
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

14565..15080
DNA (516bp) protein (172aa)
id=5091147 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Glycogen synthase {ECO:0000313|EMBL:KKP35947.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
ar4r2_scaffold_1173_17

Not on your lists

comp(15126..16178)
DNA (1053bp) protein (351aa)
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=123590 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_1173_18
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(16253..18541)
DNA (2289bp) protein (763aa)
DNA topoisomerase 1 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2ADJ5_9BACT
DNA topoisomerase I rbh
Tax=CG_GN02-01
ar4r2_scaffold_1173_19
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

18699..19388
DNA (690bp) protein (230aa)
ATPase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSH7_METIM
ATPase
ATPase {ECO:0000313|EMBL:AIJ05152.1}; TaxID=1301915 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. JH146.;"
Displaying 19 items

View Taxonomy