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ar4r2_scaffold_399

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_399_1
CG_GN02-02, Gracilibacteria, Bacteria

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2..343
DNA (342bp) protein (114aa)
Transposase IS200-family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C7A8_9CLOT
transposase IS200-family protein
Tax=CG_GN02-02
ar4r2_scaffold_399_2

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comp(450..1178)
DNA (729bp) protein (243aa)
Putative membrane protein n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A0ACW5_STRAM id=132085 bin=ACD80 species=Streptomyces ambofaciens genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24746.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_399_3
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1887..2345
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D4D367
Uncharacterized protein {ECO:0000313|EMBL:EMZ22218.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
transposase IS200-family protein
ar4r2_scaffold_399_4

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2605..3681
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0L2_9BACE id=132086 bin=ACD80 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24748.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Glycosyl transferase family 4
ar4r2_scaffold_399_5
unknown

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comp(3740..4075)
DNA (336bp) protein (112aa)

This feature has no annotations

ar4r2_scaffold_399_6
unknown

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comp(4098..4757)
DNA (660bp) protein (220aa)

This feature has no annotations

ar4r2_scaffold_399_7
unknown

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comp(4786..6228)
DNA (1443bp) protein (481aa)

This feature has no annotations

ar4r2_scaffold_399_8

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6594..8468
DNA (1875bp) protein (625aa)
aas:Aasi_0559 thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=132087 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
thrS2; threonyl-tRNA synthetase
ar4r2_scaffold_399_9
unknown

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comp(8598..8966)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI00037B1F3F
ar4r2_scaffold_399_10

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9084..10475
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Asparagine--tRNA ligase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YHB6_9BACT rbh
hypothetical protein
ar4r2_scaffold_399_11

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10487..10900
DNA (414bp) protein (138aa)
Histidine triad (HIT) protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGW3_9EURY id=132092 bin=ACD80 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD80 organism_group=SR1
Histidine triad (HIT) protein {ECO:0000313|EMBL:EKD24755.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
histidine triad (HIT) protein
ar4r2_scaffold_399_12

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10922..11530
DNA (609bp) protein (203aa)
hypothetical protein; K07002 id=132081 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24705.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_399_13

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11670..12515
DNA (846bp) protein (282aa)
hypothetical protein; K01081 5'-nucleotidase [EC:3.1.3.5] id=132084 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24708.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_399_14

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comp(12697..15003)
DNA (2307bp) protein (769aa)
cst:CLOST_2304 yhgF; transcriptional accessory protein; K06959 id=132094 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24707.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_399_15

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comp(15086..15745)
DNA (660bp) protein (220aa)
Nudix hydrolase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YH87_9BACT rbh
Nudix hydrolase {ECO:0000313|EMBL:EKD24709.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
NUDIX hydrolase
ar4r2_scaffold_399_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15825..16517)
DNA (693bp) protein (231aa)
pantetheine-phosphate adenylyltransferase
pantetheine-phosphate adenylyltransferase id=983213 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=CG_Woesearch_02
ar4r2_scaffold_399_17

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17023..17946
DNA (924bp) protein (308aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] id=132091 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24723.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_399_18

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17965..18882
DNA (918bp) protein (306aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] id=132091 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24723.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_399_19

Not on your lists

comp(18931..20289)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XHK9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24726.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_399_20

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comp(20443..21510)
DNA (1068bp) protein (356aa)
phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=132100 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Uncharacterized protein {ECO:0000313|EMBL:EKD24727.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_399_21

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21713..22696
DNA (984bp) protein (328aa)
DNA protecting protein DprA; K04096 DNA processing protein id=132095 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24728.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_399_22
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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22781..23182
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AV30_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL01201.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
ar4r2_scaffold_399_23
unknown

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comp(23264..23659)
DNA (396bp) protein (132aa)

This feature has no annotations

ar4r2_scaffold_399_24

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23863..24447
DNA (585bp) protein (195aa)
transmembrane_regions 10..32 id=132116 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24729.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_399_25

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comp(24672..25715)
DNA (1044bp) protein (348aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1X3U0_9BACT rbh
hypothetical protein
ar4r2_scaffold_399_26
unknown

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comp(26061..27371)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI00037459A4
ar4r2_scaffold_399_27
ACD80, SR1, Bacteria

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comp(27389..27679)
DNA (291bp) protein (97aa)
hypothetical protein id=132061 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Tax=ACD80
ar4r2_scaffold_399_28
unknown

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comp(27983..28516)
DNA (534bp) protein (178aa)

This feature has no annotations

ar4r2_scaffold_399_29

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comp(28567..30288)
DNA (1722bp) protein (574aa)
RNA methyltransferase id=132101 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
RNA methyltransferase {ECO:0000313|EMBL:EKD24732.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_399_30

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comp(30304..30876)
DNA (573bp) protein (191aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Adenylate kinase n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZG56_NODSP id=132102 bin=ACD80 species=Nodularia spumigena genus=Nodularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=ACD80 organism_group=SR1 rbh
hypothetical protein
Displaying items 1-30 of 63 in total

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