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This organism can only be binned in the context of its binning project 14_0929_12_30cm. Please contact the project owner (sdiamond@berkeley.edu) to become a member and gain access.

cg1_0.2A_scaffold_238

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2A_scaffold_238_1
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(174..581)
DNA (408bp) protein (136aa)
Tax=CG_GN02-01
cg1_0.2A_scaffold_238_2
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

1492..1851
DNA (360bp) protein (120aa)
Tax=CG_GN02-01
cg1_0.2A_scaffold_238_3
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(3155..4954)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XWB7_9BACT rbh
typA; GTP-binding protein TypA; K06207 GTP-binding protein Tax=CG_GN02-01
hypothetical protein
cg1_0.2A_scaffold_238_4
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5356..5700)
DNA (345bp) protein (115aa)
Tax=CG_GN02-01
cg1_0.2A_scaffold_238_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6214..6447)
DNA (234bp) protein (78aa)
hypothetical protein Tax=CG_GN02-01
hypothetical protein id=123771 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2A_scaffold_238_6
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6673..7158)
DNA (486bp) protein (162aa)
hypothetical protein Tax=CG_GN02-01
hypothetical protein id=123771 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2A_scaffold_238_7
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(7395..8012)
DNA (618bp) protein (206aa)
alkyl hydroperoxide reductase; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=CG_GN02-01
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] id=33930 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
alkyl hydroperoxide reductase
cg1_0.2A_scaffold_238_8
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

8296..9045
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GX81_9BACT rbh
multidrug ABC transporter ATPase Tax=CG_GN02-01
multidrug ABC transporter ATPase
cg1_0.2A_scaffold_238_9
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

9073..9687
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YEA9_9BACT
Uncharacterized protein Tax=CG_GN02-01
cg1_0.2A_scaffold_238_10
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

9977..10423
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AV30_PELPD
hypothetical protein Tax=CG_GN02-01
hypothetical protein
cg1_0.2A_scaffold_238_11
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

10715..11164
DNA (450bp) protein (150aa)
mnmA; tRNA-specific 2-thiouridylase mnmA; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=CG_GN02-01
tRNA-specific 2-thiouridylase mnmA n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5Q6_9CHLA id=123725 bin=ACD78 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
cg1_0.2A_scaffold_238_12
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

11266..11448
DNA (183bp) protein (61aa)
Tax=CG_GN02-01
cg1_0.2A_scaffold_238_13
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

11791..12018
DNA (228bp) protein (76aa)
Tax=CG_GN02-01
cg1_0.2A_scaffold_238_14
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

12247..12384
DNA (138bp) protein (46aa)
Tax=CG_GN02-01
cg1_0.2A_scaffold_238_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(12433..12678)
DNA (246bp) protein (82aa)
Peptidase M23 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF68_9FIRM id=123736 bin=ACD78 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Peptidase M23 Tax=CG_GN02-01
cg1_0.2A_scaffold_238_16
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(12895..13548)
DNA (654bp) protein (218aa)
Peptidase M23 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF68_9FIRM id=123736 bin=ACD78 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Peptidase M23 Tax=CG_GN02-01
Displaying 16 items

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