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08E140C01_10kDa_scaffold_4053

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_4053_1
unknown

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comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

08E140C01_10kDa_scaffold_4053_2
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(61..807)
DNA (747bp) protein (249aa)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.31 {ECO:0000256|HAMAP-Rule:MF_01139};; Ditrans,polycis-undecapreny
uppS; undecaprenyl diphosphate synthase (EC:2.5.1.31) rbh
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SUC6_PSEME rbh
08E140C01_10kDa_scaffold_4053_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(825..1382)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IDU8_PSEPS rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1453503 species="Bacteria;
frr; Ribosome-recycling factor rbh
08E140C01_10kDa_scaffold_4053_4
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1379..2122)
DNA (744bp) protein (248aa)
pyrH; uridylate kinase (EC:2.7.4.-) rbh
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=3 Tax=Pseudomonas aeruginosa group RepID=F4DPP7_PSEMN rbh
08E140C01_10kDa_scaffold_4053_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2308..3171)
DNA (864bp) protein (288aa)
Elongation factor Ts n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U332_PSEME rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacte
tsf; elongation factor Ts rbh
08E140C01_10kDa_scaffold_4053_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3301..4020)
DNA (720bp) protein (240aa)
30S ribosomal protein S2 n=2 Tax=cellular organisms RepID=U1TZD4_PSEME rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
rpsB; 30S ribosomal protein S2
08E140C01_10kDa_scaffold_4053_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4307..5089
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SUD1_PSEME rbh
methionine aminopeptidase rbh
08E140C01_10kDa_scaffold_4053_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5175..6590
DNA (1416bp) protein (472aa)
glnD; protein-P-II uridylyltransferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SCC0_PSEME
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
08E140C01_10kDa_scaffold_4053_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6746..7792
DNA (1047bp) protein (349aa)
glnD; PII uridylyl-transferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SCC0_PSEME
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
08E140C01_10kDa_scaffold_4053_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7830..9026
DNA (1197bp) protein (399aa)
dapC; succinyldiaminopimelate transaminase (EC:2.6.1.17) rbh
succinyldiaminopimelate aminotransferase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FEBD2E rbh
Succinyldiaminopimelate aminotransferase {ECO:0000313|EMBL:ERH49431.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
08E140C01_10kDa_scaffold_4053_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9331..9678
DNA (348bp) protein (116aa)
ArsC; arsenate reductase glutaredoxin family protein (EC:1.-.-.-)
ArsC family transcriptional regulator n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U337_PSEME
ArsC family transcriptional regulator {ECO:0000313|EMBL:EZH84187.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas o
08E140C01_10kDa_scaffold_4053_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9715..10674
DNA (960bp) protein (320aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Pseudomonas mendocina RepID=UPI00036A8375
tetrahydrodipicolinate N-succinyltransferase
08E140C01_10kDa_scaffold_4053_13
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10785..11939
DNA (1155bp) protein (385aa)
csdA; cysteine sulfinate desulfinase (EC:4.4.1.16) rbh
Cysteine sulfinate desulfinase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K6Z4_PSEPS rbh
Cysteine sulfinate desulfinase {ECO:0000313|EMBL:KFJ91171.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
08E140C01_10kDa_scaffold_4053_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12411..12941
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI00036409B8
Uncharacterized protein {ECO:0000313|EMBL:EZH84191.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
hypothetical protein
08E140C01_10kDa_scaffold_4053_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13074..13535)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1ST58_PSEME
Uncharacterized protein {ECO:0000313|EMBL:ERH49436.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
hypothetical protein
08E140C01_10kDa_scaffold_4053_16
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13575..14417)
DNA (843bp) protein (281aa)
Amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U339_PSEME rbh
amino acid ABC transporter periplasmic protein rbh
Amino acid ABC transporter periplasmic protein {ECO:0000313|EMBL:CDM41403.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseu
08E140C01_10kDa_scaffold_4053_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14519..15328)
DNA (810bp) protein (270aa)
ThiF domain-containing protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1TZE2_PSEME rbh
ThiF domain-containing protein {ECO:0000313|EMBL:ERH49438.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
UBA/ThiF-type NAD/FAD binding protein rbh
08E140C01_10kDa_scaffold_4053_18
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15528..16550
DNA (1023bp) protein (341aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
dapE; Succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
succinyl-diaminopimelate desuccinylase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002D4F05A
08E140C01_10kDa_scaffold_4053_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16561..17367
DNA (807bp) protein (269aa)
rRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.51) rbh
23S rRNA m(1)G-745 methyltransferase n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XWV5_PSEMY rbh
23S rRNA m(1)G-745 methyltransferase {ECO:0000313|EMBL:ABP85821.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
08E140C01_10kDa_scaffold_4053_20
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17394..17765
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B9B8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KFJ91164.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-
hypothetical protein
08E140C01_10kDa_scaffold_4053_21
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17978..18139)
DNA (162bp) protein (54aa)
Cold shock protein (Beta-ribbon, CspA family) n=2 Tax=Pseudomonas aeruginosa group RepID=I7IY98_PSEPS
cspA1; cold shock protein (beta-ribbon, CspA family)
Cold-shock protein {ECO:0000313|EMBL:ERH49442.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina
08E140C01_10kDa_scaffold_4053_22
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18369..19361)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JJ38_PSEPS rbh
Uncharacterized protein {ECO:0000313|EMBL:KFJ91162.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-
hypothetical protein rbh
08E140C01_10kDa_scaffold_4053_23
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21175..21906)
DNA (732bp) protein (244aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa group RepID=F4DPR9_PSEMN rbh
hypothetical protein rbh
ABC transporter permease {ECO:0000313|EMBL:KJU77948.1}; ABC transporter, permease protein {ECO:0000313|EMBL:CDR92039.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadal
08E140C01_10kDa_scaffold_4053_24
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21903..22826)
DNA (924bp) protein (308aa)
putative ABC-2 type transport system ATP-binding protein (EC:3.6.3.30) rbh
ABC transporter ATP-binding protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1ST66_PSEME rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERH49446.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
08E140C01_10kDa_scaffold_4053_25
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22950..23306)
DNA (357bp) protein (119aa)
Integron integrase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DPS1_PSEMN
integron integrase
Integron integrase {ECO:0000313|EMBL:AEB59383.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina
08E140C01_10kDa_scaffold_4053_26
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23340..23915)
DNA (576bp) protein (192aa)
Integron integrase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DPS1_PSEMN
integron integrase
Integron integrase {ECO:0000313|EMBL:AEB59383.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina
08E140C01_10kDa_scaffold_4053_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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24075..24758
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003741DC0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK66314.1}; TaxID=1038923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
hypothetical protein
08E140C01_10kDa_scaffold_4053_28
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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24855..25112
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2INW2_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ENA29092.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H
08E140C01_10kDa_scaffold_4053_29
unknown

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25232..25942
DNA (711bp) protein (237aa)

This feature has no annotations

08E140C01_10kDa_scaffold_4053_30
unknown

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26022..26330
DNA (309bp) protein (103aa)
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy