ggKbase home page

08E140C01_10kDa_scaffold_7204

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_7204_1
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..440)
DNA (438bp) protein (146aa)
FMN-dependent alpha-hydroxy acid dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
hypothetical protein n=1 Tax=Methylotenera RepID=UPI000364FA8D
FMN-dependent alpha-hydroxy acid dehydrogenase
08E140C01_10kDa_scaffold_7204_2
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(443..1120)
DNA (678bp) protein (226aa)
2og-fe(ii) oxygenase; K07336 PKHD-type hydroxylase [EC:1.14.11.-] Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
nuclease PIN n=1 Tax=Methylotenera mobilis RepID=UPI00037F572F rbh
2og-fe(ii) oxygenase
08E140C01_10kDa_scaffold_7204_3
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1191..3461)
DNA (2271bp) protein (757aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=12497348 bin=THIO_MID species=Methylotenera mobilis genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
TonB-dependent receptor
08E140C01_10kDa_scaffold_7204_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3606..4769)
DNA (1164bp) protein (388aa)
ornithine decarboxylase (EC:4.1.1.17) rbh
Ornithine decarboxylase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SMY6_PSEME rbh
Ornithine decarboxylase {ECO:0000313|EMBL:ERH53175.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
08E140C01_10kDa_scaffold_7204_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5150..5428)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQF2_PSEMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP83568.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendoc
08E140C01_10kDa_scaffold_7204_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5412..6158)
DNA (747bp) protein (249aa)
ABC transporter related protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQF1_PSEMY rbh
ABC transporter-like protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ABP83567.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
08E140C01_10kDa_scaffold_7204_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6155..6997)
DNA (843bp) protein (281aa)
Transport system permease protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQF0_PSEMY
transport system permease
Transport system permease protein {ECO:0000313|EMBL:ABP83566.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
08E140C01_10kDa_scaffold_7204_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7044..7508)
DNA (465bp) protein (155aa)
Periplasmic binding protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQE9_PSEMY
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABP83565.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sou
08E140C01_10kDa_scaffold_7204_9
unknown

Not on your lists

7613..8026
DNA (414bp) protein (138aa)

This feature has no annotations

08E140C01_10kDa_scaffold_7204_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7978..8235)
DNA (258bp) protein (86aa)
TonB-dependent receptor n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQE8_PSEMY
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABP83564.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
08E140C01_10kDa_scaffold_7204_11
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8445..9419)
DNA (975bp) protein (325aa)
TonB-dependent receptor n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQE8_PSEMY
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABP83564.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
08E140C01_10kDa_scaffold_7204_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9730..10344)
DNA (615bp) protein (205aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQE7_PSEMY
integral membrane sensor signal transduction histidine kinase
Displaying 12 items

View Taxonomy