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08E140C01_10kDa_scaffold_1309

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_1309_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..97
DNA (96bp) protein (32aa)
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KJU76157.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleov
08E140C01_10kDa_scaffold_1309_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109..1185)
DNA (1077bp) protein (359aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1390370 species="Bacteria; Proteo
alr; alanine racemase (EC:5.1.1.1) rbh
Alanine racemase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U9Q3_PSEME rbh
08E140C01_10kDa_scaffold_1309_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1367..2551)
DNA (1185bp) protein (395aa)
Replicative DNA helicase n=2 Tax=Pseudomonas aeruginosa group RepID=F4DP81_PSEMN
replicative DNA helicase
DNA helicase {ECO:0000313|EMBL:EZH76267.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligen
08E140C01_10kDa_scaffold_1309_4
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2573..3019)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K5E6_PSEPS
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans
08E140C01_10kDa_scaffold_1309_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3099..3881)
DNA (783bp) protein (261aa)
membrane protein n=1 Tax=Pseudomonas mendocina RepID=UPI00036B8AC3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB56753.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
08E140C01_10kDa_scaffold_1309_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3865..4107)
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=6 Tax=Pseudomonas RepID=RS18_PSEMY
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovoran
08E140C01_10kDa_scaffold_1309_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4136..4558)
DNA (423bp) protein (141aa)
30S ribosomal protein S6 n=6 Tax=Pseudomonas RepID=RS6_PSEMY
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
08E140C01_10kDa_scaffold_1309_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4640..5347)
DNA (708bp) protein (236aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP
rlmB; RNA methyltransferase, TrmH family (EC:2.1.1.-)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UDC7_PSEME rbh
08E140C01_10kDa_scaffold_1309_9
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5353..7653)
DNA (2301bp) protein (767aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1453503 species="Bacteria; Proteobacteria; Gam
Ribonuclease R n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T3F3_PSEME rbh
RNAse R rbh
08E140C01_10kDa_scaffold_1309_trna_1
unknown

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7861..7944
DNA (84bp)
transferRNA
08E140C01_10kDa_scaffold_1309_trna_2
unknown

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8032..8115
DNA (84bp)
transferRNA
08E140C01_10kDa_scaffold_1309_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8240..10174)
DNA (1935bp) protein (645aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DNI8_PSEMN rbh
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEB56748.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so
08E140C01_10kDa_scaffold_1309_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10337..11632)
DNA (1296bp) protein (432aa)
adenylosuccinate synthetase (EC:6.3.4.4) rbh
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JI05_PSEPS rbh
08E140C01_10kDa_scaffold_1309_12
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11689..12615)
DNA (927bp) protein (309aa)
ATP phosphoribosyltransferase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002D39A0E
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
ATP phosphoribosyltransferase regulatory subunit
08E140C01_10kDa_scaffold_1309_13
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12693..12932)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2Z7K6_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:GAD63721.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcal
hypothetical protein
08E140C01_10kDa_scaffold_1309_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12984..13853)
DNA (870bp) protein (290aa)
hflC; HflC protein (EC:3.4.-.-) rbh
Protein HflC n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T3E8_PSEME rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes
08E140C01_10kDa_scaffold_1309_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13853..15022)
DNA (1170bp) protein (390aa)
HflK protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DNI3_PSEMN rbh
HflK protein rbh
HflK protein {ECO:0000313|EMBL:AEB56743.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strai
08E140C01_10kDa_scaffold_1309_16
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15120..16421)
DNA (1302bp) protein (434aa)
GTPase HflX n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T4G7_PSEME rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudom
HSR1-like GTP-binding protein rbh
08E140C01_10kDa_scaffold_1309_17
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16434..16694)
DNA (261bp) protein (87aa)
RNA-binding protein Hfq n=2 Tax=Pseudomonas aeruginosa group RepID=I7K5D3_PSEPS
hfq; RNA-binding protein Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseud
08E140C01_10kDa_scaffold_1309_18
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16795..17766)
DNA (972bp) protein (324aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75) rbh
tRNA dimethylallyltransferase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UDB5_PSEME rbh
08E140C01_10kDa_scaffold_1309_19
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17821..19692)
DNA (1872bp) protein (624aa)
DNA mismatch repair protein MutL n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FC909F rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
DNA mismatch repair protein rbh
08E140C01_10kDa_scaffold_1309_20
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19701..21128)
DNA (1428bp) protein (476aa)
amiC; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) rbh
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SMG7_PSEME rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ERH53010.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
08E140C01_10kDa_scaffold_1309_21
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21139..21612)
DNA (474bp) protein (158aa)
ATPase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003657387 rbh
ATPase {ECO:0000313|EMBL:KFJ92167.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
hypothetical protein
08E140C01_10kDa_scaffold_1309_22
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21594..23135)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T4G3_PSEME rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH53009.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
yjeF; carbohydrate kinase, YjeF related protein rbh
08E140C01_10kDa_scaffold_1309_23
Pseudomonas sp. CMAA1215, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23341..23970)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U7A1C3_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ERO63384.1}; TaxID=1387231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. C
08E140C01_10kDa_scaffold_1309_24
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24166..24708)
DNA (543bp) protein (181aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
orn; oligoribonuclease (EC:3.1.-.-) rbh
Oligoribonuclease n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UDB0_PSEME rbh
08E140C01_10kDa_scaffold_1309_25
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24766..25560)
DNA (795bp) protein (265aa)
putative Trans-aconitate 2-methyltransferase (EC:2.1.1.144) rbh
Putative Trans-aconitate 2-methyltransferase {ECO:0000313|EMBL:CDM39127.1}; EC=2.1.1.144 {ECO:0000313|EMBL:CDM39127.1};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomon
Putative Trans-aconitate 2-methyltransferase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IXA9_PSEPS rbh
08E140C01_10kDa_scaffold_1309_26
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25648..26679
DNA (1032bp) protein (344aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomo
rsgA; ribosome biogenesis GTPase (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SMG4_PSEME rbh
08E140C01_10kDa_scaffold_1309_27
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26673..27668)
DNA (996bp) protein (332aa)
Flagellar motor protein MotB n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T4F8_PSEME rbh
Flagellar motor protein MotB {ECO:0000313|EMBL:KJU76132.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pse
motB1; Chemotaxis protein rbh
08E140C01_10kDa_scaffold_1309_28
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27672..28523)
DNA (852bp) protein (284aa)
Flagellar motor protein MotA n=2 Tax=Pseudomonas RepID=U1U9M9_PSEME rbh
Flagellar motor protein MotA {ECO:0000313|EMBL:ERH53003.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
motA1; Chemotaxis protein rbh
Displaying items 1-30 of 41 in total

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