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08E140C01_10kDa_scaffold_1517

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_1517_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..132)
DNA (132bp) protein (44aa)
lauroyl acyltransferase n=1 Tax=Pseudomonas alcaliphila RepID=UPI00030B5FDE
Nitrate ABC transporter ATPase {ECO:0000313|EMBL:ERH53615.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
ABC transporter
08E140C01_10kDa_scaffold_1517_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129..794)
DNA (666bp) protein (222aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWB2_PSEMN
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEB57430.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadac
08E140C01_10kDa_scaffold_1517_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1206..2222)
DNA (1017bp) protein (339aa)
lipid kinase n=1 Tax=Pseudomonas alcaliphila RepID=UPI00031BADFC rbh
Lipid kinase {ECO:0000313|EMBL:KJU76924.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes g
nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein rbh
08E140C01_10kDa_scaffold_1517_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2627..3067
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SQR2_PSEME
Uncharacterized protein {ECO:0000313|EMBL:ERH54190.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
hypothetical protein
08E140C01_10kDa_scaffold_1517_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3243..4127)
DNA (885bp) protein (295aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=1390370 species="Bacteria; Proteo
mmsB; 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31) rbh
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UBD1_PSEME rbh
08E140C01_10kDa_scaffold_1517_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4250..5353)
DNA (1104bp) protein (368aa)
enoyl-CoA hydratase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003064C5E rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJU76932.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcali
enoyl-CoA hydratase/isomerase rbh
08E140C01_10kDa_scaffold_1517_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5506..6324)
DNA (819bp) protein (273aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJU76933.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJU76933.1};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
enoyl-CoA hydratase (EC:4.2.1.17) rbh
Enoyl-CoA hydratase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SP67_PSEME rbh
08E140C01_10kDa_scaffold_1517_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6403..7566)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T572_PSEME rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERH53621.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendoc
acyl-CoA dehydrogenase domain-containing protein rbh
08E140C01_10kDa_scaffold_1517_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7573..8820)
DNA (1248bp) protein (416aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UF24_PSEME rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERH53622.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadace
extracellular ligand-binding receptor rbh
08E140C01_10kDa_scaffold_1517_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8918..10414)
DNA (1497bp) protein (499aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27) rbh
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002FF4C76 rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KJU76936.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas o
08E140C01_10kDa_scaffold_1517_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10540..11421
DNA (882bp) protein (294aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas mendocina DLHK RepID=J7UBP7_PSEME rbh
mmsR; MmsAB operon regulatory protein rbh
MmsAB operon regulatory protein {ECO:0000313|EMBL:CDM41555.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovor
08E140C01_10kDa_scaffold_1517_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11438..11851)
DNA (414bp) protein (138aa)
Thioesterase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T7S6_PSEME
Thioesterase {ECO:0000313|EMBL:KJU76938.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes g
thioesterase superfamily protein
08E140C01_10kDa_scaffold_1517_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11949..12761)
DNA (813bp) protein (271aa)
Histidine kinase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SQR6_PSEME rbh
Histidine kinase {ECO:0000313|EMBL:ERH54195.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EG
putative signal transduction protein rbh
08E140C01_10kDa_scaffold_1517_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12900..13589
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
ung; uracil-DNA glycosylase (EC:3.2.2.-) rbh
Uracil-DNA glycosylase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SP72_PSEME rbh
08E140C01_10kDa_scaffold_1517_15
unknown

Not on your lists

13739..14029
DNA (291bp) protein (97aa)

This feature has no annotations

08E140C01_10kDa_scaffold_1517_16
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15132..15662)
DNA (531bp) protein (177aa)
ABC transporter related protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DX40_PSEMN
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEB57469.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
08E140C01_10kDa_scaffold_1517_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15666..16433)
DNA (768bp) protein (256aa)
Leucine/isoleucine/valine transporter ATP-binding subunit n=1 Tax=Pseudomonas mendocina DLHK RepID=J7UI21_PSEME rbh
livG; leucine/isoleucine/valine transporter ATP-binding subunit rbh
L-isoleucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ABP84149.1}; TaxID=399739 species="Bac
08E140C01_10kDa_scaffold_1517_18
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16430..17689)
DNA (1260bp) protein (420aa)
High-affinity branched-chain amino acid transport system permease protein livM n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IY14_PSEPS rbh
livM; High-affinity branched-chain amino acid transport system permease protein livM rbh
High-affinity branched-chain amino acid transport system permease protein livM {ECO:0000313|EMBL:CDM41549.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pse
08E140C01_10kDa_scaffold_1517_19
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17686..18609)
DNA (924bp) protein (308aa)
Branched-chain amino acid transporter permease subunit LivH n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T661_PSEME rbh
Branched-chain amino acid transporter permease subunit LivH {ECO:0000313|EMBL:KJU76951.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo
inner-membrane translocator rbh
08E140C01_10kDa_scaffold_1517_20
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18726..19847)
DNA (1122bp) protein (374aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002DB9C44 rbh
Leucine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJU76946.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseud
extracellular ligand-binding receptor rbh
08E140C01_10kDa_scaffold_1517_21
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20143..20460
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K6N3_PSEPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDR92174.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
08E140C01_10kDa_scaffold_1517_22
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20555..20926
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JIV8_PSEPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ90388.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-
08E140C01_10kDa_scaffold_1517_23
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20997..21215)
DNA (219bp) protein (73aa)
Bfd protein n=2 Tax=Pseudomonas aeruginosa group RepID=I7IY16_PSEPS
bfd; Bacterioferritin-associated ferredoxin
Bacterioferritin-associated ferredoxin {ECO:0000313|EMBL:CDM41544.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas
08E140C01_10kDa_scaffold_1517_24
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22048..22695)
DNA (648bp) protein (216aa)
rnt; ribonuclease T (EC:3.1.13.-) rbh
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=633150 speci
Ribonuclease T n=2 Tax=Pseudomonas aeruginosa group RepID=I7IDR2_PSEPS rbh
08E140C01_10kDa_scaffold_1517_25
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

22856..23662
DNA (807bp) protein (269aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY12809.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
08E140C01_10kDa_scaffold_1517_26
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23774..24721
DNA (948bp) protein (316aa)
OmpA/MotB domain-containing protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JIW0_PSEPS rbh
OmpA/MotB domain-containing protein rbh
OmpA/MotB domain-containing protein {ECO:0000313|EMBL:CDM41540.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas ole
08E140C01_10kDa_scaffold_1517_27
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24839..25756
DNA (918bp) protein (306aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GPA5_PSEST
Displaying 27 items

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