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08E140C01_10kDa_scaffold_1544

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_1544_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..752)
DNA (750bp) protein (250aa)
AbrB protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JIY8_PSEPS
AbrB; putative ammonia monooxygenase
Putative ammonia monooxygenase {ECO:0000313|EMBL:CDR92109.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/p
08E140C01_10kDa_scaffold_1544_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(736..2256)
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XSA4_PSEMY rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABP84220.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendoc
08E140C01_10kDa_scaffold_1544_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2258..2701)
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Pseudomonas mendocina RepID=J7UHU6_PSEME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP84221.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
08E140C01_10kDa_scaffold_1544_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2764..3741)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina DLHK RepID=J7SMJ3_PSEME rbh
hypothetical protein rbh
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABP84222.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
08E140C01_10kDa_scaffold_1544_5
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3774..5039)
DNA (1266bp) protein (422aa)
outer membrane porin (EC:3.4.21.-) rbh
Outer membrane porin {ECO:0000313|EMBL:CDR92105.1}; EC=3.4.21.- {ECO:0000313|EMBL:CDR92105.1};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
Outer membrane porin n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K6T6_PSEPS rbh
08E140C01_10kDa_scaffold_1544_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5041..5976
DNA (936bp) protein (312aa)
Transcriptional regulator n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SPE5_PSEME rbh
Transcriptional regulator {ECO:0000313|EMBL:ERH53700.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas men
two component transcriptional regulator rbh
08E140C01_10kDa_scaffold_1544_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5973..7370
DNA (1398bp) protein (466aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
tctE; integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3) rbh
Sensor histidine kinase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T5E3_PSEME rbh
08E140C01_10kDa_scaffold_1544_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7353..8108)
DNA (756bp) protein (252aa)
Putative polar amino acid transport system substrate-binding proetin n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K1N4_PSEPS rbh
putative polar amino acid transport system substrate-binding proetin rbh
Putative polar amino acid transport system substrate-binding proetin {ECO:0000313|EMBL:CDR92102.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
08E140C01_10kDa_scaffold_1544_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8174..9010)
DNA (837bp) protein (279aa)
HDOD domain-containing protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UBK6_PSEME rbh
HDOD domain-containing protein {ECO:0000313|EMBL:ERH53703.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
putative signal transduction protein rbh
08E140C01_10kDa_scaffold_1544_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9057..9998)
DNA (942bp) protein (314aa)
Aminomethyltransferase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T6E3_PSEME rbh
tRNA-modifying protein YgfZ {ECO:0000256|SAAS:SAAS00211200}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
Unclassified rbh
08E140C01_10kDa_scaffold_1544_11
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10613..11935
DNA (1323bp) protein (441aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JV56_BURP1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABA49465.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
08E140C01_10kDa_scaffold_1544_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12189..12380
DNA (192bp) protein (64aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDR92096.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
08E140C01_10kDa_scaffold_1544_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12374..12955
DNA (582bp) protein (194aa)
RNA polymerase sigma factor n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UBL1_PSEME rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
RNA polymerase sigma factor AlgU rbh
08E140C01_10kDa_scaffold_1544_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12986..13558
DNA (573bp) protein (191aa)
Anti sigma-E protein, RseA n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DY15_PSEMN rbh
anti sigma-E protein, RseA rbh
Anti sigma-E protein, RseA {ECO:0000313|EMBL:AEB57555.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas me
08E140C01_10kDa_scaffold_1544_15
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13574..14521
DNA (948bp) protein (316aa)
Sigma factor AlgU regulatory protein MucB n=1 Tax=Pseudomonas mendocina EGD-AQ5 PF5_PSEME">RepID=U1SPF5_PSEME rbh
RNA polymerase sigma-H factor AlgU {ECO:0000313|EMBL:KJU77047.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovora
rseB; Sigma factor algU regulatory protein mucB rbh
08E140C01_10kDa_scaffold_1544_16
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14518..14973
DNA (456bp) protein (152aa)
positive regulator for alginate biosynthesis MucC n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002F607C8
Alginate regulatory protein {ECO:0000313|EMBL:KJU77048.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
rseC; sigma-E factor negative regulatory protein RseC
08E140C01_10kDa_scaffold_1544_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15009..16433
DNA (1425bp) protein (475aa)
serine peptidase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003130B5D rbh
Serine peptidase {ECO:0000313|EMBL:ERH53712.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EG
protease Do rbh
08E140C01_10kDa_scaffold_1544_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16585..18384
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UBL7_PSEME rbh
elongation factor 4 rbh
08E140C01_10kDa_scaffold_1544_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18391..19245
DNA (855bp) protein (285aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadace
Signal peptidase I n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DY20_PSEMN rbh
signal peptidase I rbh
08E140C01_10kDa_scaffold_1544_20
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19334..19711
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SPG0_PSEME
Uncharacterized protein {ECO:0000313|EMBL:ERH53715.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
hypothetical protein
08E140C01_10kDa_scaffold_1544_21
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19708..20397
DNA (690bp) protein (230aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T5F5_PSEME rbh
ribonuclease III rbh
08E140C01_10kDa_scaffold_1544_22
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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20390..21289
DNA (900bp) protein (300aa)
GTPase Era n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DY23_PSEMN rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
GTP-binding protein Era rbh
08E140C01_10kDa_scaffold_1544_23
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21347..22036
DNA (690bp) protein (230aa)
DNA repair protein RecO n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DY24_PSEMN rbh
DNA repair protein RecO rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1001585 species="Bacteria; Proteobacteria; Ga
08E140C01_10kDa_scaffold_1544_24
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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22029..22847
DNA (819bp) protein (273aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
Pyridoxine 5'-phosphate synthase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DY25_PSEMN rbh
pyridoxine 5'-phosphate synthase rbh
08E140C01_10kDa_scaffold_1544_25
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22844..23728)
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SPG4_PSEME rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KJU77057.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleov
LysR family transcriptional regulator rbh
08E140C01_10kDa_scaffold_1544_26
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24108..24638)
DNA (531bp) protein (177aa)
tRNA (mo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194472}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194476};; TaxID=330 species="Bacte
tRNA (mo5U34)-methyltransferase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7UHR8_PSEME
putative methyltransferase
08E140C01_10kDa_scaffold_1544_27
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24903..25502)
DNA (600bp) protein (200aa)
tRNA (cmo5U34)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01589}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_01589};; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
tRNA (cmo5U34)-methyltransferase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7SMI8_PSEME
putative methyltransferase
08E140C01_10kDa_scaffold_1544_28
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25459..26289)
DNA (831bp) protein (277aa)
Membrane protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T6G4_PSEME rbh
Membrane protein {ECO:0000313|EMBL:EZH77086.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcal
hypothetical protein rbh
08E140C01_10kDa_scaffold_1544_29
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26443..27522
DNA (1080bp) protein (360aa)
Sigma-70 factor, ECF subfamily n=1 Tax=Pseudomonas aeruginosa E2 RepID=K1D8Q0_PSEAI
RNA polymerase ECF-subfamily sigma factor
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KFX69599.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
08E140C01_10kDa_scaffold_1544_30
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27681..27935)
DNA (255bp) protein (85aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent hel
RNA polymerase-associated protein RapA n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XSD4_PSEMY
ATP-dependent helicase HepA
Displaying items 1-30 of 38 in total

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