ggKbase home page

08E140C01_10kDa_scaffold_1774

Search features with annotation key words

Displaying items 1-30 of 48 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_1774_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..638)
DNA (636bp) protein (212aa)
folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U261_PSEME
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
08E140C01_10kDa_scaffold_1774_trna_1
unknown

Not on your lists

908..981
DNA (74bp)
transferRNA
08E140C01_10kDa_scaffold_1774_trna_2
unknown

Not on your lists

1024..1096
DNA (73bp)
transferRNA
08E140C01_10kDa_scaffold_1774_trna_3
unknown

Not on your lists

1156..1237
DNA (82bp)
transferRNA
08E140C01_10kDa_scaffold_1774_2
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1411..2679
DNA (1269bp) protein (423aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
trigger factor n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003735AE8 rbh
tig; trigger factor
08E140C01_10kDa_scaffold_1774_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2774..3415
DNA (642bp) protein (214aa)
clpP; ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92) rbh
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit n=3 Tax=Pseudomonas RepID=I7K202_PSEPS rbh
08E140C01_10kDa_scaffold_1774_4
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3667..4947
DNA (1281bp) protein (427aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SVX5_PSEME rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonada
ATP-dependent protease ATP-binding subunit ClpX rbh
08E140C01_10kDa_scaffold_1774_5
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5097..7403
DNA (2307bp) protein (769aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B3L5_PSEAC
Lon-A peptidase. Serine peptidase. MEROPS family S16
08E140C01_10kDa_scaffold_1774_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7539..7811
DNA (273bp) protein (91aa)
Bacterial nucleoid protein HU beta subunit n=6 Tax=Pseudomonas RepID=A4XTZ8_PSEMY
histone-like DNA-binding protein
Transcriptional regulator {ECO:0000313|EMBL:ERH50403.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas men
08E140C01_10kDa_scaffold_1774_7
unknown

Not on your lists

comp(8030..9412)
DNA (1383bp) protein (461aa)

This feature has no annotations

08E140C01_10kDa_scaffold_1774_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9523..9705
DNA (183bp) protein (61aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomona
peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudomonas alcaliphila RepID=UPI00030E8124
PpiC-type peptidyl-prolyl cis-trans isomerase
08E140C01_10kDa_scaffold_1774_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9760..11307)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SF59_PSEME rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH50405.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
phospholipase D/transphosphatidylase rbh
08E140C01_10kDa_scaffold_1774_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11503..12294)
DNA (792bp) protein (264aa)
fabI1; enoyl-(acyl-carrier-protein) reductase (EC:1.3.1.9) rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudo
Enoyl-[acyl-carrier-protein] reductase [NADH] n=2 Tax=Pseudomonas aeruginosa group RepID=I7J021_PSEPS rbh
08E140C01_10kDa_scaffold_1774_11
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12323..13936)
DNA (1614bp) protein (538aa)
Microcin C ABC transporter ATP-binding protein YejF n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U5W6_PSEME rbh
Microcin C ABC transporter ATP-binding protein YejF {ECO:0000313|EMBL:ERH50407.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
ABC transporter-like protein rbh
08E140C01_10kDa_scaffold_1774_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13938..14957)
DNA (1020bp) protein (340aa)
ABC transporter permease n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002E6AC10 rbh
ABC transporter permease {ECO:0000313|EMBL:KJU80034.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoa
dppC3; Oligopeptide transport system permease protein oppC rbh
08E140C01_10kDa_scaffold_1774_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14960..16045)
DNA (1086bp) protein (362aa)
Inner membrane ABC transporter permease protein n=2 Tax=Pseudomonas aeruginosa group RepID=I7K961_PSEPS rbh
Inner membrane ABC transporter permease protein rbh
Inner membrane ABC transporter permease protein {ECO:0000313|EMBL:CDM40794.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pse
08E140C01_10kDa_scaffold_1774_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16047..17894)
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SF64_PSEME rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH50410.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
extracellular solute-binding protein rbh
08E140C01_10kDa_scaffold_1774_15
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17891..19720)
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003129CC2 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJU80037.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas o
ABC transporter, periplasmic substrate-binding protein rbh
08E140C01_10kDa_scaffold_1774_16
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19799..21319
DNA (1521bp) protein (507aa)
HD domain protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K3W7_PSEPS rbh
Histidine kinase {ECO:0000313|EMBL:KJU80038.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligen
HD domain protein rbh
08E140C01_10kDa_scaffold_1774_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21264..22505)
DNA (1242bp) protein (414aa)
Lytic transglycosylase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U5X1_PSEME rbh
Lytic transglycosylase {ECO:0000313|EMBL:ERH50412.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendoc
lytic transglycosylase catalytic subunit subunit rbh
08E140C01_10kDa_scaffold_1774_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22738..23511)
DNA (774bp) protein (258aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
gloB; hydroxyacylglutathione hydrolase, putative (EC:3.1.2.6) rbh
Hydroxyacylglutathione hydrolase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U274_PSEME rbh
08E140C01_10kDa_scaffold_1774_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23584..24342
DNA (759bp) protein (253aa)
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC:2.1.1.-) rbh
SAM-dependent methyltransferase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SX73_PSEME rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:ERH50414.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
08E140C01_10kDa_scaffold_1774_20
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24401..24853
DNA (453bp) protein (151aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SF67_PSEME rbh
ribonuclease H rbh
08E140C01_10kDa_scaffold_1774_21
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24927..25685
DNA (759bp) protein (253aa)
dnaQ1; DNA polymerase III, epsilon subunit (EC:2.7.7.7) rbh
DNA polymerase III subunit epsilon n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SVY9_PSEME rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:ERH50416.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
08E140C01_10kDa_scaffold_1774_22
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25874..26368
DNA (495bp) protein (165aa)
lysine decarboxylase (EC:4.1.1.18)
Putative Orn/Lys/Arg decarboxylase {ECO:0000313|EMBL:CDM40785.1}; EC=4.1.1.19 {ECO:0000313|EMBL:CDM40785.1};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pse
lysine decarboxylase n=1 Tax=Pseudomonas mendocina RepID=UPI00037089F7
08E140C01_10kDa_scaffold_1774_23
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26365..27906
DNA (1542bp) protein (514aa)
adi; putative Orn/Lys/Arg decarboxylase (EC:4.1.1.19)
Lysine decarboxylase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U5X5_PSEME
Lysine decarboxylase {ECO:0000313|EMBL:KJU80043.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcal
08E140C01_10kDa_scaffold_1774_24
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28108..28920
DNA (813bp) protein (271aa)
paaG3; enoyl-CoA hydratase/isomerase family protein (EC:4.2.1.17) rbh
Enoyl-CoA hydratase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U278_PSEME rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJU80044.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcali
08E140C01_10kDa_scaffold_1774_25
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28958..30637
DNA (1680bp) protein (560aa)
Ferrous iron transporter B n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SX77_PSEME rbh
Ferrous iron transporter B {ECO:0000313|EMBL:KJU80045.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseud
fimL; PilL protein rbh
08E140C01_10kDa_scaffold_1774_26
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30637..31461
DNA (825bp) protein (275aa)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=1390370 species="Bacteria; P
nudC; NUDIX hydrolase (EC:3.6.1.22) rbh
NADH pyrophosphatase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SF72_PSEME rbh
08E140C01_10kDa_scaffold_1774_27
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31546..32325)
DNA (780bp) protein (260aa)
membrane protein n=1 Tax=Pseudomonas mendocina RepID=UPI000380AE92 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB58256.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
Displaying items 1-30 of 48 in total

View Taxonomy