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08E140C01_10kDa_scaffold_10390

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_10390_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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56..322
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SW19_PSEME
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovoran
rpsQ; 30S ribosomal protein S17
08E140C01_10kDa_scaffold_10390_2
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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346..714
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=10 Tax=Gammaproteobacteria RepID=RL14_PSEMY
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudom
08E140C01_10kDa_scaffold_10390_3
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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726..1040
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U4Q1_PSEME
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovoran
50S ribosomal protein L24
08E140C01_10kDa_scaffold_10390_4
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1060..1599
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SUS3_PSEME rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans
50S ribosomal protein L5 rbh
08E140C01_10kDa_scaffold_10390_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1614..1919
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=5 Tax=Pseudomonas RepID=F4DLC9_PSEMN
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
08E140C01_10kDa_scaffold_10390_6
unknown

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2114..2248
DNA (135bp) protein (45aa)

This feature has no annotations

08E140C01_10kDa_scaffold_10390_7
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2465..2998
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Pseudomonas alcaliphila RepID=UPI000371676A rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
rplF; 50S ribosomal protein L6 rbh
08E140C01_10kDa_scaffold_10390_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3010..3360
DNA (351bp) protein (117aa)
50S ribosomal protein L18 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U4P7_PSEME
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
08E140C01_10kDa_scaffold_10390_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3390..3776
DNA (387bp) protein (129aa)
30S ribosomal protein S5 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SUR8_PSEME
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
rpsE; 30S ribosomal protein S5
08E140C01_10kDa_scaffold_10390_10
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3779..3958
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=7 Tax=Pseudomonas RepID=RL30_PSEMY
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
08E140C01_10kDa_scaffold_10390_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3961..4182
DNA (222bp) protein (74aa)
50S ribosomal protein L15 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SW10_PSEME
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
08E140C01_10kDa_scaffold_10390_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4208..5344
DNA (1137bp) protein (379aa)
Protein translocase subunit SecY n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U109_PSEME
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovo
secY; Preprotein translocase subunit secY
08E140C01_10kDa_scaffold_10390_13
Pseudomonas savastanoi, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5373..5489
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=66 Tax=Pseudomonas RepID=RL36_PSE14
LSU ribosomal protein L36p
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=875330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
08E140C01_10kDa_scaffold_10390_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5604..5963)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BZE4_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ59627.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
08E140C01_10kDa_scaffold_10390_15
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5988..6377
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=7 Tax=Pseudomonas RepID=RS11_PSEMY
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
08E140C01_10kDa_scaffold_10390_16
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6395..7015
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SW06_PSEME rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pse
rpsD; 30S ribosomal protein S4 rbh
08E140C01_10kDa_scaffold_10390_17
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7142..8017
DNA (876bp) protein (292aa)
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=2 Tax=Pseudomonas aeruginosa group RepID=I7J2A3_PSEPS
08E140C01_10kDa_scaffold_10390_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8331..9710
DNA (1380bp) protein (460aa)
Transporter, NhaC family n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XZ63_PSEMY rbh
Na+/H+ antiporter NhaC rbh
Transporter, NhaC family {ECO:0000313|EMBL:ABP86629.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
08E140C01_10kDa_scaffold_10390_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9876..12032
DNA (2157bp) protein (719aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
Catalase-peroxidase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SUQ8_PSEME rbh
catalase/peroxidase HPI
08E140C01_10kDa_scaffold_10390_20
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12093..12356
DNA (264bp) protein (88aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
Bfr; Bacterioferritin (EC:1.16.3.1)
Bacterioferritin n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SDY5_PSEME
08E140C01_10kDa_scaffold_10390_21
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12334..12600
DNA (267bp) protein (89aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo
Bacterioferritin n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SDY5_PSEME
bacterioferritin
08E140C01_10kDa_scaffold_10390_22
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12707..13831)
DNA (1125bp) protein (375aa)
excinuclease ABC subunit A n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002ED2358
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
uvrA; excinuclease ABC subunit A
Displaying 22 items

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