ggKbase home page

08E140C01_10kDa_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 410 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_9_1
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182..928)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039FE639 rbh
Probable transcriptional regulatory protein pmpR {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
putative transcriptional regulatory protein
08E140C01_10kDa_scaffold_9_2
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1022..2797)
DNA (1776bp) protein (592aa)
aspartyl-tRNA synthetase n=1 Tax=Pseudomonas pelagia RepID=UPI00039EE670 rbh
aspS; aspartyl-tRNA synthetase
AspS protein {ECO:0000313|EMBL:AJE20764.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIM
08E140C01_10kDa_scaffold_9_3

Not on your lists

2996..3814
DNA (819bp) protein (273aa)
Putative oxidoreductase n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AHU6_PSERE rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09743.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative oxidoreductase
08E140C01_10kDa_scaffold_9_4

Not on your lists

3874..4344
DNA (471bp) protein (157aa)
ferritin n=1 Tax=Pseudomonas pelagia RepID=UPI0003A52448
Uncharacterized protein {ECO:0000313|EMBL:KKN97948.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ferritin Dps family protein
08E140C01_10kDa_scaffold_9_5
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4487..5092
DNA (606bp) protein (202aa)
cold-shock protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A4803C
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:CEA02279.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sou
cold-shock protein
08E140C01_10kDa_scaffold_9_6

Not on your lists

comp(5124..5339)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A8516C
Uncharacterized protein {ECO:0000313|EMBL:KKO09740.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
08E140C01_10kDa_scaffold_9_7
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5339..5767)
DNA (429bp) protein (143aa)
histidine triad (HIT) protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039B2313
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:AJF05637.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalka
08E140C01_10kDa_scaffold_9_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6077..7336
DNA (1260bp) protein (420aa)
porin n=1 Tax=Pseudomonas pelagia RepID=UPI0003A210FE rbh
Porin {ECO:0000313|EMBL:EZQ19062.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
porin
08E140C01_10kDa_scaffold_9_9
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7486..9219
DNA (1734bp) protein (578aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Proline--tRNA ligase; Prolyl-tRNA
proS; Proline--tRNA ligase (EC:6.1.1.15)
prolyl-tRNA synthetase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A6B431 rbh
08E140C01_10kDa_scaffold_9_10

Not on your lists

9232..9918
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003B758DA
Uncharacterized protein {ECO:0000313|EMBL:KKO09736.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
lipoprotein
08E140C01_10kDa_scaffold_9_11

Not on your lists

9890..10498
DNA (609bp) protein (203aa)
transglycosylase n=1 Tax=Pseudomonas pelagia RepID=UPI000399C1C2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97955.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transglycosylase
08E140C01_10kDa_scaffold_9_12

Not on your lists

comp(10511..10786)
DNA (276bp) protein (92aa)
acylphosphatase (EC:3.6.1.7)
acylphosphatase n=1 Tax=Pseudomonas pelagia RepID=UPI00039FC08C
Uncharacterized protein {ECO:0000313|EMBL:KKO09734.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_9_13

Not on your lists

comp(10806..11246)
DNA (441bp) protein (147aa)
peroxiredoxin n=1 Tax=Pseudomonas pelagia RepID=UPI0003B70D0A
Uncharacterized protein {ECO:0000313|EMBL:KKO09733.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
resA; Thiol-disulfide oxidoreductase resA
08E140C01_10kDa_scaffold_9_14
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11258..12505)
DNA (1248bp) protein (416aa)
membrane protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039CD39C rbh
UPF0761 membrane protein BN1049_00714 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
hypothetical protein
08E140C01_10kDa_scaffold_9_15

Not on your lists

12600..12953
DNA (354bp) protein (118aa)
arsenate reductase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A66BF8
Uncharacterized protein {ECO:0000313|EMBL:KKN97959.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
arsenate reductase
08E140C01_10kDa_scaffold_9_16
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12950..13570
DNA (621bp) protein (207aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidored
NAD(P)H quinone oxidoreductase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A602EF rbh
NAD(P)H-quinone oxidoreductase
08E140C01_10kDa_scaffold_9_17
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13554..13964
DNA (411bp) protein (137aa)
membrane protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039B0839
Membrane protein {ECO:0000313|EMBL:EZQ19055.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;
hypothetical protein
08E140C01_10kDa_scaffold_9_18
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14002..14697)
DNA (696bp) protein (232aa)
DNA replication initiation factor n=1 Tax=Pseudomonas pelagia RepID=UPI0003B6D9EB rbh
DNA replication initiation factor {ECO:0000313|EMBL:CEA02320.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
DNA replication initiation factor
08E140C01_10kDa_scaffold_9_19

Not on your lists

comp(14722..15894)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003AB2010 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09726.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
08E140C01_10kDa_scaffold_9_20
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16117..17184
DNA (1068bp) protein (356aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
phosphoribosylaminoimidazole synthetase n=1 Tax=Pseudomonas pelagia RepID=UPI0003B3BE54 rbh
08E140C01_10kDa_scaffold_9_21

Not on your lists

17189..17881
DNA (693bp) protein (231aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039BD8E4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09724.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_9_22
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17859..18620
DNA (762bp) protein (254aa)
dehydrogenase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A6FB2C rbh
Isoprenoid biosynthesis protein {ECO:0000313|EMBL:CEA02330.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
hypothetical protein
08E140C01_10kDa_scaffold_9_23

Not on your lists

comp(18698..19921)
DNA (1224bp) protein (408aa)
ehhadh3; Peroxisomal bifunctional enzyme (EC:4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Pseudomonas pelagia RepID=UPI00039DB73A rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO09722.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_9_24
Idiomarina salinarum, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20132..20710
DNA (579bp) protein (193aa)
IclR family transcriptional regulator n=1 Tax=Pseudomonas pelagia RepID=UPI0003A458E0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFZ31047.1}; TaxID=435908 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina salinarum.
hypothetical protein
08E140C01_10kDa_scaffold_9_25

Not on your lists

comp(20729..21616)
DNA (888bp) protein (296aa)
Bile acid:sodium symporter n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6W3V4_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN72452.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
yocS; sodium-dependent transporter yocS
08E140C01_10kDa_scaffold_9_26

Not on your lists

21781..22719
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SP67_FERBD
Uncharacterized protein {ECO:0000313|EMBL:KKN72451.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LysR family transcriptional regulator
08E140C01_10kDa_scaffold_9_27

Not on your lists

comp(23118..23429)
DNA (312bp) protein (104aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Pseudomonas pelagia RepID=UPI00039CF964
Uncharacterized protein {ECO:0000313|EMBL:KKO09720.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
antibiotic biosynthesis monooxygenase family enzyme
08E140C01_10kDa_scaffold_9_28
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23504..24358)
DNA (855bp) protein (285aa)
short-chain dehydrogenase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A54A08 rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDF85770.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
08E140C01_10kDa_scaffold_9_29
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24604..25794
DNA (1191bp) protein (397aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XSG5_PSEMY rbh
MFS transporter {ECO:0000313|EMBL:KHK66734.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksberge
major facilitator superfamily transporter
08E140C01_10kDa_scaffold_9_30

Not on your lists

comp(25829..28093)
DNA (2265bp) protein (755aa)
glucosylglycerol-phosphate synthase n=1 Tax=Pseudomonas pelagia RepID=UPI00039E930F rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN99448.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyl transferase family protein
Displaying items 1-30 of 410 in total

View Taxonomy