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08E140C01_10kDa_scaffold_11

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Displaying items 1-30 of 448 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_11_1

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comp(210..1157)
DNA (948bp) protein (316aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Pseudomonas pelagia RepID=UPI00039E3DBC rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN99937.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
08E140C01_10kDa_scaffold_11_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1487..1924)
DNA (438bp) protein (146aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudomonas pelagia RepID=UPI00039A4767
peptidylprolyl isomerase
08E140C01_10kDa_scaffold_11_3
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2244..2747)
DNA (504bp) protein (168aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
peptidase A8 n=1 Tax=Pseudomonas pelagia RepID=UPI0003A07676
08E140C01_10kDa_scaffold_11_4

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comp(2740..5571)
DNA (2832bp) protein (944aa)
isoleucyl-tRNA synthetase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A3F325 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN78355.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ileS; isoleucyl-tRNA synthetase
08E140C01_10kDa_scaffold_11_5

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comp(5594..6520)
DNA (927bp) protein (309aa)
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
FAD synthetase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A5FC42 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN78354.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_11_6
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6851..8422)
DNA (1572bp) protein (524aa)
membrane protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A34C29 rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
membrane protein
08E140C01_10kDa_scaffold_11_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8664..8936
DNA (273bp) protein (91aa)
30S ribosomal protein S20 n=1 Tax=Pseudomonas pelagia RepID=UPI00039C40F4
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
rpsT; 30S ribosomal protein S20
08E140C01_10kDa_scaffold_11_8

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comp(9354..10472)
DNA (1119bp) protein (373aa)
gamma-glutamyl kinase (EC:2.7.2.11)
glutamate 5-kinase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A945E6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN78351.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_11_9

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comp(10817..12022)
DNA (1206bp) protein (402aa)
GTPase CgtA n=1 Tax=Pseudomonas pelagia RepID=UPI0003A2092B rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN78350.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
obgE; GTPase
08E140C01_10kDa_scaffold_11_10

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comp(12112..12369)
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Pseudomonas pelagia RepID=UPI0003A11E32
Uncharacterized protein {ECO:0000313|EMBL:KKN84039.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rpmA; 50S ribosomal protein L27
08E140C01_10kDa_scaffold_11_11
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12393..12704)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MCW3_PSEPS
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
rplU; 50S ribosomal protein L21
08E140C01_10kDa_scaffold_11_12

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12993..13961
DNA (969bp) protein (323aa)
octaprenyl diphosphate synthase n=1 Tax=Pseudomonas pelagia RepID=UPI000399D37F rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN84037.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ispB; octaprenyl-diphosphate synthase
08E140C01_10kDa_scaffold_11_13
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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13978..14691
DNA (714bp) protein (238aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ71733.1}; Flags: Fragment;; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides
08E140C01_10kDa_scaffold_11_14
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14866..15969
DNA (1104bp) protein (368aa)
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; EC=2.1.1.35 {ECO:0000256|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}
tRNA (uracil-5-)-methyltransferase (EC:2.1.1.35)
tRNA (uracil-5-)-methyltransferase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A5383A rbh
08E140C01_10kDa_scaffold_11_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16096..16575
DNA (480bp) protein (160aa)
pilus assembly protein FimT n=1 Tax=Pseudomonas pelagia RepID=UPI00039EDB00
Tfp pilus assembly protein FimT-like protein
Tfp pilus assembly protein FimT-like protein {ECO:0000313|EMBL:AEB57081.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
08E140C01_10kDa_scaffold_11_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16578..17108
DNA (531bp) protein (177aa)
pilus modification protein PilV n=1 Tax=Pseudomonas pelagia RepID=UPI0003A1C5FC
pilV; type IV pilus modification protein PilV
Type IV pilus modification protein PilV {ECO:0000313|EMBL:ABR82627.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
08E140C01_10kDa_scaffold_11_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17105..17869
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A11005 rbh
type 4 fimbrial biogenesis protein PilW
Type 4 fimbrial biogenesis protein PilW {ECO:0000313|EMBL:AEB57079.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
08E140C01_10kDa_scaffold_11_18
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

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17866..18525
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A67521
pilX; type 4 fimbrial biogenesis protein PilX; K02673 type IV pilus assembly protein PilX Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
type 4 fimbrial biogenesis protein PilX
08E140C01_10kDa_scaffold_11_19
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18543..22394
DNA (3852bp) protein (1284aa)
type IV fimbrial biogenesis protein PilY1 n=1 Tax=Pseudomonas pelagia RepID=UPI00039BCD57 rbh
pilY1; Putative type IV fimbrial biogenesis protein PilY1
PilY1 protein {ECO:0000313|EMBL:AEA82843.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain
08E140C01_10kDa_scaffold_11_20
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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22394..22813
DNA (420bp) protein (140aa)
pilus assembly protein PilE n=1 Tax=Pseudomonas pelagia RepID=UPI0003A91ECE
Pilus assembly protein PilE {ECO:0000313|EMBL:KIL06160.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
pilE; Tfp pilus assembly protein PilE-like protein
08E140C01_10kDa_scaffold_11_21
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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22881..23405
DNA (525bp) protein (175aa)
general secretion pathway protein H n=1 Tax=Pseudomonas pelagia RepID=UPI0003A28B17
Putative type IV pilus-like protein {ECO:0000313|EMBL:CEA02917.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
fimT; type IV pilus biogenesis protein, FimT
08E140C01_10kDa_scaffold_11_22
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23433..24650)
DNA (1218bp) protein (406aa)
argJ; ornithine acetyltransferase (EC:2.3.1.1 2.3.1.35)
N-acetylglutamate synthase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A206E9 rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;
08E140C01_10kDa_scaffold_11_23

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comp(24992..27802)
DNA (2811bp) protein (937aa)
preprotein translocase subunit SecA n=1 Tax=Pseudomonas pelagia RepID=UPI0003A277D8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO02010.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
secA; preprotein translocase subunit SecA
08E140C01_10kDa_scaffold_11_24

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comp(27937..28854)
DNA (918bp) protein (306aa)
membrane protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003B6225F rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO02011.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase M23
08E140C01_10kDa_scaffold_11_25

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28941..29393
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039E9B66
Uncharacterized protein {ECO:0000313|EMBL:KKO02012.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
08E140C01_10kDa_scaffold_11_26

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comp(29695..30615)
DNA (921bp) protein (307aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A5A66F rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO02013.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_11_27

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comp(30721..31917)
DNA (1197bp) protein (399aa)
peptidase M23 n=1 Tax=Pseudomonas pelagia RepID=UPI0003A35424 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO02014.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ftsZ; cell division protein FtsZ
08E140C01_10kDa_scaffold_11_28

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comp(32005..33234)
DNA (1230bp) protein (410aa)
cell division protein FtsA n=1 Tax=Pseudomonas pelagia RepID=UPI00039A3765 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO02015.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cell division protein FtsA
08E140C01_10kDa_scaffold_11_29

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comp(33244..34104)
DNA (861bp) protein (287aa)
cell division protein FtsQ n=1 Tax=Pseudomonas pelagia RepID=UPI0003A29C16 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO02016.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cell division protein FtsQ
08E140C01_10kDa_scaffold_11_30
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(34114..35031)
DNA (918bp) protein (306aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A5BBDF rbh
D-alanine--D-alanine ligase
Displaying items 1-30 of 448 in total

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