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08E140C01_10kDa_scaffold_449

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_449_1
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..899)
DNA (897bp) protein (299aa)
flagellar motor switch protein FliG n=1 Tax=Methylomicrobium buryatense RepID=UPI000369892B rbh
fliG; flagellar motor switch protein FliG rbh
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source
08E140C01_10kDa_scaffold_449_2
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(892..2640)
DNA (1749bp) protein (583aa)
flagellar M-ring protein FliF n=1 Tax=Methylomicrobium buryatense RepID=UPI00034D9E35 rbh
fliF; flagellar M-ring protein rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomi
08E140C01_10kDa_scaffold_449_3
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2658..2987)
DNA (330bp) protein (110aa)
flagellar hook-basal body protein FliE n=1 Tax=Methylomicrobium buryatense RepID=UPI000377887F
fliE; flagellar hook-basal body complex protein fliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales;
08E140C01_10kDa_scaffold_449_4
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3038..4405)
DNA (1368bp) protein (456aa)
Fis family transcriptional regulator n=1 Tax=Methylomicrobium buryatense RepID=UPI00034D6376 rbh
zraR; transcriptional regulatory protein zraR rbh
Transcriptional regulatory protein zraR {ECO:0000313|EMBL:CCE22599.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" sour
08E140C01_10kDa_scaffold_449_5
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4389..5633)
DNA (1245bp) protein (415aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae;
histidine kinase n=1 Tax=Methylomicrobium buryatense RepID=UPI00034D6843 rbh
PAS/PAC sensor signal transduction histidine kinase rbh
08E140C01_10kDa_scaffold_449_6
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5754..7205)
DNA (1452bp) protein (484aa)
Fis family transcriptional regulator n=1 Tax=Methylomicrobium buryatense RepID=UPI000346121A rbh
Fis family transcriptional regulator rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:CCE22597.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomi
08E140C01_10kDa_scaffold_449_7
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8093..9259
DNA (1167bp) protein (389aa)
membrane protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000347F8FB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE24773.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
08E140C01_10kDa_scaffold_449_8
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9356..9991
DNA (636bp) protein (212aa)
forkhead-associated protein n=1 Tax=Methylomicrobium buryatense RepID=UPI0003482978 rbh
forkhead-associated protein rbh
Forkhead-associated protein {ECO:0000313|EMBL:CCE24774.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylom
08E140C01_10kDa_scaffold_449_9
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9988..10365
DNA (378bp) protein (126aa)
Cyclic diguanosine monophosphate-binding protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T333_META2
type IV pilus assembly PilZ
Cyclic diguanosine monophosphate-binding protein {ECO:0000256|PIRNR:PIRNR028141}; Short=c-di-GMP-binding protein {ECO:0000256|PIRNR:PIRNR028141};; Pilz domain-containing protein {ECO:0000256|PIRNR:PIR
08E140C01_10kDa_scaffold_449_10
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10401..11783)
DNA (1383bp) protein (461aa)
DNA repair protein radA n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T334_META2 rbh
radA; DNA repair protein RadA (DNA repair protein Sms) rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomic
08E140C01_10kDa_scaffold_449_11
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12102..12773)
DNA (672bp) protein (224aa)
Virulence transcriptional regulatory protein phoP n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T335_META2 rbh
phoP; Virulence transcriptional regulatory protein phoP rbh
Virulence transcriptional regulatory protein phoP {ECO:0000313|EMBL:CCE24777.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobi
08E140C01_10kDa_scaffold_449_12
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12787..13053)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000347CF84
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE24778.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
08E140C01_10kDa_scaffold_449_13
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13163..14146)
DNA (984bp) protein (328aa)
peptidase S49 n=1 Tax=Methylomicrobium buryatense RepID=UPI00034DB2D6 rbh
peptidase S49 rbh
Putative peptidase S49 {ECO:0000313|EMBL:CCE24779.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrob
08E140C01_10kDa_scaffold_449_14
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14156..14803)
DNA (648bp) protein (216aa)
Putative phosphoglycolate phosphatase {ECO:0000313|EMBL:CCE24780.1}; EC=3.1.3.18 {ECO:0000313|EMBL:CCE24780.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales;
hydrolase n=1 Tax=Methylomicrobium buryatense RepID=UPI0003480337 rbh
phosphoglycolate phosphatase rbh
08E140C01_10kDa_scaffold_449_15
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14796..15752)
DNA (957bp) protein (319aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:CCE24781.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria;
23S rRNA pseudouridylate synthase C n=1 Tax=Methylomicrobium buryatense RepID=UPI000345470B rbh
rluC; rRNA pseudouridylate synthase C rbh
08E140C01_10kDa_scaffold_449_16
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16267..18456
DNA (2190bp) protein (730aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1091494 species="Bacteria; Proteobacteria; Ga
ribonuclease E n=1 Tax=Methylomicrobium buryatense RepID=UPI00034BD778 rbh
rne; ribonuclease E rbh
08E140C01_10kDa_scaffold_449_17
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(18876..19688)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034DC4C6
Ion transport 2 domain-containing protein
Ion transport 2 domain protein {ECO:0000313|EMBL:AEH45283.1}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="
08E140C01_10kDa_scaffold_449_18
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19834..23328)
DNA (3495bp) protein (1165aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170, ECO:0000313|EMBL:CCE24785.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacte
DNA polymerase III subunit alpha n=1 Tax=Methylomicrobium buryatense RepID=UPI000349E435 rbh
dnaE; DNA polymerase III subunit alpha rbh
08E140C01_10kDa_scaffold_449_19
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23894..24457)
DNA (564bp) protein (188aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
ribonuclease HII n=1 Tax=Methylomicrobium buryatense RepID=UPI00034D062B rbh
rnhB; ribonuclease HII (RNase HII) rbh
08E140C01_10kDa_scaffold_449_20
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24460..25191)
DNA (732bp) protein (244aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T346_META2 rbh
lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
08E140C01_10kDa_scaffold_449_21
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25233..25676)
DNA (444bp) protein (148aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T347_META2
fabZ; 3-hydroxyacyl-ACP dehydratase
08E140C01_10kDa_scaffold_449_22
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25748..26263)
DNA (516bp) protein (172aa)
membrane protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034B6441 rbh
outer membrane chaperone Skp rbh
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:CCE24790.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="
08E140C01_10kDa_scaffold_449_23
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26521..28803)
DNA (2283bp) protein (761aa)
Outer membrane protein assembly factor BamA n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T349_META2 rbh
surface antigen (D15) rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; M
Displaying 23 items

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