ggKbase home page

08E140C01_10kDa_scaffold_1116

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_1116_1
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200..2245)
DNA (2046bp) protein (682aa)
TonB-dependent receptor n=1 Tax=delta proteobacterium NaphS2 RepID=D8EVU8_9DELT rbh
TonB-dependent receptor {ECO:0000313|EMBL:EFK12378.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
TonB-dependent receptor
08E140C01_10kDa_scaffold_1116_2
unknown

Not on your lists

comp(2272..2862)
DNA (591bp) protein (197aa)
Uncharacterized protein {ECO:0000313|EMBL:CPR17670.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
hypothetical protein id=2253935 bin=GWB2_Bacteroidetes_32_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
08E140C01_10kDa_scaffold_1116_3
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2804..3553)
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ80400.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
tRNA(Ile2) 2-agmatinylcytidine synthetase id=4128434 bin=GWF2_Bacteroidetes_38_335 species=Nitrobacter hamburgensis genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
08E140C01_10kDa_scaffold_1116_4
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4237..5124)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI0003465651 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIL98972.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospir
molybdate-binding domain-containing protein
08E140C01_10kDa_scaffold_1116_5
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5429..5905
DNA (477bp) protein (159aa)
formate dehydrogenase subunit gamma (EC:1.2.1.2)
formate dehydrogenase subunit gamma n=1 Tax=Methylomicrobium buryatense RepID=UPI000344CAB0
NADH dehydrogenase (Ubiquinone) 24 kDa subunit {ECO:0000313|EMBL:EGW22412.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" s
08E140C01_10kDa_scaffold_1116_6
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5902..7455
DNA (1554bp) protein (518aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
formate dehydrogenase subunit beta n=1 Tax=Methylomicrobium buryatense RepID=UPI00034B5D88 rbh
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit {ECO:0000313|EMBL:EIC29237.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Meth
08E140C01_10kDa_scaffold_1116_7
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7475..10330
DNA (2856bp) protein (952aa)
formate dehydrogenase subunit alpha n=1 Tax=Methylomicrobium buryatense RepID=UPI00034CAB37 rbh
Formate dehydrogenase, alpha subunit, archaeal-type {ECO:0000313|EMBL:EIC29236.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrob
formate dehydrogenase subunit alpha
08E140C01_10kDa_scaffold_1116_8
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10323..11180
DNA (858bp) protein (286aa)
Protein FdhD homolog n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SVZ5_META2 rbh
fdsC; NAD-linked formate dehydrogenase, molybdenum containing, accessory protein rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylom
08E140C01_10kDa_scaffold_1116_9
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11343..11555
DNA (213bp) protein (71aa)
NAD-linked formate dehydrogenase, molybdenum containing, delta subunit {ECO:0000313|EMBL:CCE21915.1}; EC=1.2.1.2 {ECO:0000313|EMBL:CCE21915.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammap
NAD-linked formate dehydrogenase, molybdenum containing, delta subunit n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SVZ4_META2
fdsD; NAD-linked formate dehydrogenase, molybdenum containing, delta subunit
08E140C01_10kDa_scaffold_1116_10
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11730..12206)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000348566A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE21921.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
08E140C01_10kDa_scaffold_1116_11
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12191..12529)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI0003498F51
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE21919.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
08E140C01_10kDa_scaffold_1116_12
unknown

Not on your lists

comp(12759..12881)
DNA (123bp) protein (41aa)

This feature has no annotations

08E140C01_10kDa_scaffold_1116_13
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12934..15102)
DNA (2169bp) protein (723aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129, ECO:0000313|EMBL:CCE21914.1}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129, ECO:0000313|EMBL:CCE21914.1};;
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SVZ3_META2 rbh
hppA; K(+)-stimulated pyrophosphate-energized sodium pump rbh
08E140C01_10kDa_scaffold_1116_14
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15320..15886
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034B0BBA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE21913.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
Displaying 14 items

View Taxonomy