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BJP_08E140C01_Ig2699_Hor_218_2014_10k_Methylomicrobium_alcaliphilum_49_11

BJP_08E140C01_10KDA_Methylomicrobium_alcaliphilum_49_11
In projects: BJP_08E140C01_10KDA  |  horonobe_genomes

Consensus taxonomy: Methylomicrobium alcaliphilum  →  Methylomicrobium  →  Methylococcales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Fragmented

Displaying items 201-250 of 664 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
08E140C01_10kDa_scaffold_1665
Species: Methylomicrobium alcaliphilum (60%)
5 11727 bp 48.96 11.74 91.66
08E140C01_10kDa_scaffold_2920
Species: Methylomicrobium alcaliphilum (85.71%)
7 7502 bp 48.40 11.74 83.82
08E140C01_10kDa_scaffold_3204
Species: Methylomicrobium alcaliphilum (100%)
8 6993 bp 49.08 11.73 92.54
08E140C01_10kDa_scaffold_7883
Species: Methylomicrobium alcaliphilum (100%)
3 3277 bp 44.64 11.72 72.69
08E140C01_10kDa_scaffold_22501
Species: Methylomicrobium alcaliphilum (100%)
1 1230 bp 44.55 11.71 72.20
08E140C01_10kDa_scaffold_2805
Species: Methylomicrobium alcaliphilum (100%)
3 7778 bp 50.08 11.71 86.86
08E140C01_10kDa_scaffold_2142
Genus: Methylomonas (50%)
8 9707 bp 50.92 11.70 88.45
08E140C01_10kDa_scaffold_2944
Species: Methylomicrobium alcaliphilum (66.67%)
6 7456 bp 53.03 11.69 91.01
08E140C01_10kDa_scaffold_6008
Species: Methylomicrobium alcaliphilum (100%)
5 4119 bp 49.26 11.69 80.92
08E140C01_10kDa_scaffold_23783
Species: Methylomicrobium alcaliphilum (100%)
2 1168 bp 46.23 11.69 33.90
08E140C01_10kDa_scaffold_819
Order: Methylococcales (64.71%)
17 19437 bp 51.98 11.69 87.99
08E140C01_10kDa_scaffold_5287
Species: Methylomicrobium alcaliphilum (100%)
5 4569 bp 49.95 11.69 85.75
08E140C01_10kDa_scaffold_12390
Species: Methylomicrobium alcaliphilum (100%)
2 2173 bp 46.16 11.67 87.53
08E140C01_10kDa_scaffold_5054
Species: Methylomicrobium alcaliphilum (80%)
5 4748 bp 49.98 11.66 88.46
08E140C01_10kDa_scaffold_9403
Species: Methylomicrobium alcaliphilum (100%)
2 2792 bp 47.99 11.66 60.39
08E140C01_10kDa_scaffold_7653
Species: Methylomicrobium alcaliphilum (100%)
3 3347 bp 45.47 11.65 87.12
08E140C01_10kDa_scaffold_1838
Class: Betaproteobacteria (50%)
10 10929 bp 55.75 11.65 93.14
08E140C01_10kDa_scaffold_19541
Species: Methylomicrobium alcaliphilum (100%)
1 1404 bp 47.79 11.65 53.85
08E140C01_10kDa_scaffold_7361
Species: Methylomicrobium alcaliphilum (100%)
2 3458 bp 50.17 11.63 85.37
08E140C01_10kDa_scaffold_3124
Species: Methylomicrobium alcaliphilum (100%)
4 7145 bp 51.53 11.63 82.38
08E140C01_10kDa_scaffold_6459
Species: Methylomicrobium alcaliphilum (60%)
5 3860 bp 42.98 11.62 52.93
08E140C01_10kDa_scaffold_5151
Species: Methylomicrobium alcaliphilum (66.67%)
3 4673 bp 45.75 11.62 76.78
08E140C01_10kDa_scaffold_4753
Species: Methylomicrobium alcaliphilum (100%)
2 4981 bp 50.45 11.62 77.88
08E140C01_10kDa_scaffold_753
Species: Methylomicrobium alcaliphilum (81.25%)
16 20679 bp 48.87 11.62 88.73
08E140C01_10kDa_scaffold_3098
Species: Methylomicrobium alcaliphilum (100%)
6 7178 bp 52.10 11.62 81.58
08E140C01_10kDa_scaffold_1470
Species: Methylomicrobium alcaliphilum (72.73%)
11 12809 bp 49.61 11.61 83.61
08E140C01_10kDa_scaffold_10879
Species: Methylomicrobium alcaliphilum (50%)
2 2454 bp 45.48 11.61 66.50
08E140C01_10kDa_scaffold_5013
Species: Methylomicrobium alcaliphilum (50%)
4 4781 bp 49.03 11.61 75.42
08E140C01_10kDa_scaffold_1363
Species: Methylomicrobium alcaliphilum (76.92%)
13 13713 bp 50.51 11.58 80.57
08E140C01_10kDa_scaffold_1639
Species: Methylomicrobium alcaliphilum (100%)
8 11854 bp 48.48 11.58 81.26
08E140C01_10kDa_scaffold_7909
Species: Methylomicrobium alcaliphilum (50%)
2 3266 bp 51.96 11.57 80.37
08E140C01_10kDa_scaffold_752
Species: Methylomicrobium alcaliphilum (87.5%)
16 20750 bp 50.70 11.57 81.77
08E140C01_10kDa_scaffold_449
Species: Methylomicrobium alcaliphilum (95.65%)
23 29103 bp 47.86 11.55 86.49
08E140C01_10kDa_scaffold_2542
Species: Methylomicrobium alcaliphilum (85.71%)
7 8439 bp 47.30 11.55 88.73
08E140C01_10kDa_scaffold_1760
Order: Methylococcales (85.71%)
7 11269 bp 49.62 11.54 88.65
08E140C01_10kDa_scaffold_1331
Species: Methylomicrobium alcaliphilum (100%)
13 13918 bp 48.57 11.54 92.38
08E140C01_10kDa_scaffold_14850
Species: Methylomicrobium alcaliphilum (66.67%)
3 1832 bp 49.51 11.54 79.91
08E140C01_10kDa_scaffold_8491
Species: Methylomicrobium alcaliphilum (100%)
2 3068 bp 51.96 11.54 87.61
08E140C01_10kDa_scaffold_476
Species: Methylomicrobium alcaliphilum (90.91%)
22 27741 bp 47.89 11.52 85.82
08E140C01_10kDa_scaffold_4512
Species: Methylomicrobium alcaliphilum (66.67%)
6 5210 bp 48.60 11.52 61.84
08E140C01_10kDa_scaffold_8754
Species: Methylomicrobium alcaliphilum (100%)
3 2982 bp 48.12 11.52 86.92
08E140C01_10kDa_scaffold_11785
Species: Methylomicrobium alcaliphilum (50%)
2 2278 bp 48.73 11.52 84.42
08E140C01_10kDa_scaffold_3454
Species: Methylomicrobium alcaliphilum (55.56%)
9 6568 bp 45.93 11.51 86.19
08E140C01_10kDa_scaffold_2027
Species: Methylomicrobium alcaliphilum (100%)
12 10110 bp 46.90 11.50 82.49
08E140C01_10kDa_scaffold_4083
Species: Methylomicrobium alcaliphilum (100%)
6 5687 bp 49.32 11.50 93.63
08E140C01_10kDa_scaffold_1514
Species: Methylomicrobium alcaliphilum (100%)
13 12463 bp 48.84 11.49 93.85
08E140C01_10kDa_scaffold_913
Species: Methylomicrobium alcaliphilum (76.19%)
21 18234 bp 47.99 11.49 86.40
08E140C01_10kDa_scaffold_4328
Species: Methylomicrobium alcaliphilum (100%)
4 5417 bp 47.09 11.49 74.71
08E140C01_10kDa_scaffold_12172
Species: BJP_IG2158_Methylococcales_50_91 (75%)
4 2208 bp 50.59 11.48 86.41
08E140C01_10kDa_scaffold_1551
Species: Methylomicrobium alcaliphilum (50%)
10 12256 bp 48.16 11.47 72.26
Displaying items 201-250 of 664 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.