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08E140C01_10kDa_scaffold_532

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_532_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1431
-----------------
DNA (1431bp)
protein (477aa)
Putative membrane protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXI7_9SPHN rbh
DNA, contig: SP652 {ECO:0000313|EMBL:GAN15237.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
08E140C01_10kDa_scaffold_532_2
unknown

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1487..2029
-----------------
DNA (543bp)
protein (181aa)

This feature has no annotations

08E140C01_10kDa_scaffold_532_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2039..2974)
-----------------
DNA (936bp)
protein (312aa)
glycosyl transferase family protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026C978E rbh
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:AJP74460.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sp
08E140C01_10kDa_scaffold_532_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3073..4641)
-----------------
DNA (1569bp)
protein (523aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
trigger factor n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F5ECD6 rbh
trigger factor
08E140C01_10kDa_scaffold_532_trna_3
unknown

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comp(4713..4794)
-----------------
DNA (82bp)
transferRNA
08E140C01_10kDa_scaffold_532_5
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4955..5134
-----------------
DNA (180bp)
protein (60aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631D7D
Uncharacterized protein {ECO:0000313|EMBL:BAD56204.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
hypothetical protein
08E140C01_10kDa_scaffold_532_trna_2
unknown

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comp(5203..5276)
-----------------
DNA (74bp)
transferRNA
08E140C01_10kDa_scaffold_532_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5362..5853
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026316FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71531.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
08E140C01_10kDa_scaffold_532_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5856..8111)
-----------------
DNA (2256bp)
protein (752aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W940_9ZZZZ rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP71530.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC
08E140C01_10kDa_scaffold_532_8
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8180..9169)
-----------------
DNA (990bp)
protein (330aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonada
delta-aminolevulinic acid dehydratase n=1 Tax=Sphingomonas melonis RepID=UPI00036F9B93 rbh
delta-aminolevulinic acid dehydratase rbh
08E140C01_10kDa_scaffold_532_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9343..12180)
-----------------
DNA (2838bp)
protein (946aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valyl-tRNA synthetase n=1 Tax=Sphingomonas melonis RepID=UPI00037A14E6 rbh
valyl-tRNA synthetase
08E140C01_10kDa_scaffold_532_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12237..12734)
-----------------
DNA (498bp)
protein (166aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC9E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71521.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
08E140C01_10kDa_scaffold_532_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12802..14310)
-----------------
DNA (1509bp)
protein (503aa)
membrane protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000300C1FF rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP71520.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC
08E140C01_10kDa_scaffold_532_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14324..14983)
-----------------
DNA (660bp)
protein (220aa)
L-isoaspartate family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVL6_9SPHN
DNA, contig: SP612 {ECO:0000313|EMBL:GAN12638.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
protein-L-isoaspartate O-methyltransferase
08E140C01_10kDa_scaffold_532_trna_1
unknown

Not on your lists

15152..15222
-----------------
DNA (71bp)
transferRNA
08E140C01_10kDa_scaffold_532_13
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15246..16679)
-----------------
DNA (1434bp)
protein (478aa)
DNA recombination protein RmuC n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B558 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48322.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
08E140C01_10kDa_scaffold_532_14
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16790..17254)
-----------------
DNA (465bp)
protein (155aa)
hypothetical protein n=1 Tax=Sphingomonas RepID=UPI00028948AD
Uncharacterized protein {ECO:0000313|EMBL:EZP48963.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
08E140C01_10kDa_scaffold_532_15
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17356..17553)
-----------------
DNA (198bp)
protein (66aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026302A8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE53805.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
08E140C01_10kDa_scaffold_532_16
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17690..17845
-----------------
DNA (156bp)
protein (52aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B59E80
Uncharacterized protein {ECO:0000313|EMBL:EZP48961.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
08E140C01_10kDa_scaffold_532_17
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17966..18334)
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003049DA0
pilZ domain protein
PilZ domain protein {ECO:0000313|EMBL:AJP72001.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. W
08E140C01_10kDa_scaffold_532_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18433..18897)
-----------------
DNA (465bp)
protein (155aa)
molecular chaperone DnaK n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCAA2
molecular chaperone DnaK
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomo
08E140C01_10kDa_scaffold_532_19
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19594..20286)
-----------------
DNA (693bp)
protein (231aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INH4_9SPHN
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67953.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
hypothetical protein
08E140C01_10kDa_scaffold_532_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20420..20860)
-----------------
DNA (441bp)
protein (147aa)
Host attachment protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6F0C6
Host attachment protein
Host attachment protein {ECO:0000313|EMBL:AJP72003.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
08E140C01_10kDa_scaffold_532_21
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20951..22231
-----------------
DNA (1281bp)
protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
serine--tRNA ligase (EC:6.1.1.11) rbh
seryl-tRNA synthetase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4E6D9 rbh
08E140C01_10kDa_scaffold_532_22

Not on your lists

22338..23102
-----------------
DNA (765bp)
protein (255aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=77133 speci
stationary phase survival protein SurE n=1 Tax=Sphingomonas elodea RepID=UPI00026302AE rbh
stationary phase survival protein SurE rbh
08E140C01_10kDa_scaffold_532_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23095..24174
-----------------
DNA (1080bp)
protein (360aa)
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB07A rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP72006.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC
08E140C01_10kDa_scaffold_532_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24216..25217
-----------------
DNA (1002bp)
protein (334aa)
Putative K+ channel TrkA-N n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INH8_9SPHN rbh
potassium transporter TrkA
Potassium transporter TrkA {ECO:0000313|EMBL:AJP72007.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomona
08E140C01_10kDa_scaffold_532_25
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25311..26063
-----------------
DNA (753bp)
protein (251aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XP72_HIRBI
alpha/beta hydrolase
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:ACT60252.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirs
Displaying 28 items

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