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08E140C01_10kDa_scaffold_56

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Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_10kDa_scaffold_56_1

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comp(1..1305)
DNA (1305bp) protein (435aa)
Rhs element Vgr protein n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CMU1_PSEST
Uncharacterized protein {ECO:0000313|EMBL:KKN57948.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Rhs element Vgr protein
08E140C01_10kDa_scaffold_56_2

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comp(1588..2310)
DNA (723bp) protein (241aa)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A9DC87 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97559.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
UDP-2,3-diacylglucosamine hydrolase
08E140C01_10kDa_scaffold_56_3
Pseudomonas tuomuerensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2320..2814)
DNA (495bp) protein (165aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
ppiB; Peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
cyclophilin n=1 Tax=Pseudomonas pelagia RepID=UPI00039EA99F rbh
08E140C01_10kDa_scaffold_56_4
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2979..4643
DNA (1665bp) protein (555aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
Glutamine--tRNA ligase n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7ERU3_PSEST
glnS; glutaminyl-tRNA synthetase
08E140C01_10kDa_scaffold_56_5
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4643..6028
DNA (1386bp) protein (462aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysteinyl-tRNA synthetase n=1 Tax=Pseudomonas pelagia RepID=UPI0003AAF14A rbh
cysteinyl-tRNA synthetase
08E140C01_10kDa_scaffold_56_6

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6241..7065
DNA (825bp) protein (275aa)
metal-dependent hydrolase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A5ECDF rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97554.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
metal-dependent hydrolase-like protein
08E140C01_10kDa_scaffold_56_7
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7141..8268
DNA (1128bp) protein (376aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Pseudomonas pelagia RepID=UPI0003A68FCA rbh
Proton-translocating NAD(P) transhydrogenase {ECO:0000313|EMBL:CEA05274.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
pntA; NAD(P) transhydrogenase alpha subunit
08E140C01_10kDa_scaffold_56_8

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8271..8609
DNA (339bp) protein (113aa)
NADP transhydrogenase subunit alpha n=1 Tax=Pseudomonas pelagia RepID=UPI00039BE26D
Uncharacterized protein {ECO:0000313|EMBL:KKN97552.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NAD(P) transhydrogenase
08E140C01_10kDa_scaffold_56_9

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8613..10037
DNA (1425bp) protein (475aa)
NADP transhydrogenase subunit alpha n=1 Tax=Pseudomonas pelagia RepID=UPI00039BEE7F rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97551.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NAD/NADP transhydrogenase subunit beta
08E140C01_10kDa_scaffold_56_10
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(10158..10589)
DNA (432bp) protein (144aa)
aldehyde-activating protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024839EB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW27906.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 1
08E140C01_10kDa_scaffold_56_11

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comp(10781..12217)
DNA (1437bp) protein (479aa)
aldehyde dehydrogenase n=1 Tax=Pseudomonas pelagia RepID=UPI000399CAAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN64226.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
aldehyde dehydrogenase
08E140C01_10kDa_scaffold_56_12

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12595..13074
DNA (480bp) protein (160aa)
transcriptional regulator n=1 Tax=Pseudomonas pelagia RepID=UPI00039FFE22
Uncharacterized protein {ECO:0000313|EMBL:KKN64225.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative Rrf2 family protein
08E140C01_10kDa_scaffold_56_13

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13195..14631
DNA (1437bp) protein (479aa)
cysteine desulfurase activator complex subunit SufB n=1 Tax=Pseudomonas pelagia RepID=UPI0003A784C5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97548.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Iron-regulated ABC transporter membrane component SufB rbh
08E140C01_10kDa_scaffold_56_14

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14682..15431
DNA (750bp) protein (250aa)
transporter n=1 Tax=Pseudomonas pelagia RepID=UPI0003A4FD09 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97547.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sufC; FeS assembly ATPase SufC rbh
08E140C01_10kDa_scaffold_56_15

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15434..16735
DNA (1302bp) protein (434aa)
FeS assembly protein SufD n=1 Tax=Pseudomonas pelagia RepID=UPI0003A6D645 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97546.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sufD; FeS assembly protein SufD rbh
08E140C01_10kDa_scaffold_56_16

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16728..17975
DNA (1248bp) protein (416aa)
selenocysteine lyase (EC:2.8.1.7) rbh
cysteine desulfurase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A85C73 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97545.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
08E140C01_10kDa_scaffold_56_17
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17986..18342
DNA (357bp) protein (119aa)
Fe-S cluster assembly scaffold protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A954B4
Iron-sulfur cluster assembly protein IscA {ECO:0000313|EMBL:CEA05253.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
HesB protein
08E140C01_10kDa_scaffold_56_18

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18364..18885
DNA (522bp) protein (174aa)
FeS assembly SUF system protein SufT n=1 Tax=Pseudomonas pelagia RepID=UPI0003A13B89 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97543.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
08E140C01_10kDa_scaffold_56_19
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18903..19325
DNA (423bp) protein (141aa)
Fe-S metabolism protein SufE n=1 Tax=Pseudomonas pelagia RepID=UPI0003A36817
Fe-S cluster assembly protein SufE {ECO:0000313|EMBL:EZQ20117.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
SufE protein probably involved in Fe-S center assembly
08E140C01_10kDa_scaffold_56_20

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19466..20461
DNA (996bp) protein (332aa)
diguanylate cyclase n=1 Tax=Pseudomonas pelagia RepID=UPI00039D138C rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN97541.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
diguanylate cyclase
08E140C01_10kDa_scaffold_56_21

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comp(20467..20910)
DNA (444bp) protein (148aa)
metal-binding protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A3A865
Uncharacterized protein {ECO:0000313|EMBL:KKN97539.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
metal-binding protein
08E140C01_10kDa_scaffold_56_22
Pseudomonas viridiflava, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21015..21803
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039B44C8
Strain LMCA8 contig_51, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29338.1}; TaxID=33069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
CHAD domain-containing protein
08E140C01_10kDa_scaffold_56_23
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21893..22777)
DNA (885bp) protein (295aa)
Ser/Thr protein phosphatase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A2F27F rbh
Ser/Thr protein phosphatase, calcineurin-like superfamily {ECO:0000313|EMBL:EHY78022.1}; TaxID=32042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo
Ser/Thr protein phosphatase, calcineurin-like superfamily rbh
08E140C01_10kDa_scaffold_56_24
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22856..24835)
DNA (1980bp) protein (660aa)
UxpB protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A93D16 rbh
Tat pathway signal protein {ECO:0000313|EMBL:EZQ17946.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bau
UxpB protein
08E140C01_10kDa_scaffold_56_25
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24838..25641)
DNA (804bp) protein (268aa)
cell envelope biogenesis protein TonB n=1 Tax=Pseudomonas pelagia RepID=UPI0003A8C62A rbh
Energy transducer TonB {ECO:0000313|EMBL:EZQ17945.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzane
Cell envelope biogenesis protein TonB
08E140C01_10kDa_scaffold_56_26
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25646..26086)
DNA (441bp) protein (147aa)
biopolymer transporter TolR n=1 Tax=Pseudomonas pelagia RepID=UPI0003A1E1B7
Biopolymer transporter TolR {ECO:0000313|EMBL:EZQ17944.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas ba
tolR1; tolR protein
08E140C01_10kDa_scaffold_56_27

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comp(26092..26781)
DNA (690bp) protein (230aa)
protein tolQ n=1 Tax=Pseudomonas pelagia RepID=UPI00039E5689 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN64210.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TolQ protein
08E140C01_10kDa_scaffold_56_28
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26870..28867)
DNA (1998bp) protein (666aa)
3-phytase (EC:3.1.3.8)
3-phytase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A1621A rbh
3-phytase {ECO:0000313|EMBL:EZQ17942.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
08E140C01_10kDa_scaffold_56_29
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28922..31447)
DNA (2526bp) protein (842aa)
TonB-denpendent receptor n=1 Tax=Pseudomonas pelagia RepID=UPI0003B7746A rbh
TonB-dependent receptor {ECO:0000313|EMBL:CEA04893.1}; Flags: Precursor;; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
TonB-dependent receptor
08E140C01_10kDa_scaffold_56_30
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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31784..32701
DNA (918bp) protein (306aa)
diguanylate cyclase n=1 Tax=Pseudomonas pelagia RepID=UPI00039D4C85 rbh
Diguanylate cyclase domain-containing protein {ECO:0000313|EMBL:CEA04895.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sou
diguanylate cyclase
Displaying items 1-30 of 108 in total

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