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08E140C01_scaffold_770_curated

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_770_curated_1
unknown

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comp(3..263)
DNA (261bp) protein (87aa)
Beta-lactamase domain protein id=3419811 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Zn-dependent hydrolase
08E140C01_scaffold_770_curated_2
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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876..1634
DNA (759bp) protein (253aa)
Transcriptional regulator, IclR family n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RBH7_SPISS
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADK79707.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
08E140C01_scaffold_770_curated_3
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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1665..3047
DNA (1383bp) protein (461aa)
class III aminotransferase; K00836 diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] rbh
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000371749E rbh
Aminotransferase class-III {ECO:0000313|EMBL:ADK79708.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
08E140C01_scaffold_770_curated_4
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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3067..4083
DNA (1017bp) protein (339aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] rbh
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 /
Aspartate-semialdehyde dehydrogenase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RBH9_SPISS rbh
08E140C01_scaffold_770_curated_5
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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4087..5268
DNA (1182bp) protein (394aa)
amidohydrolase (EC:3.5.1.47); K01436 amidohydrolase [EC:3.5.1.-] rbh
Amidohydrolase {ECO:0000313|EMBL:ADK79710.1}; EC=3.5.1.47 {ECO:0000313|EMBL:ADK79710.1};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
peptidase M20 n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037177A1 rbh
08E140C01_scaffold_770_curated_6
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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5633..6700
DNA (1068bp) protein (356aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00035D1BC9 rbh
extracellular solute-binding protein, family 7 rbh
Extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:ADK79711.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
08E140C01_scaffold_770_curated_7
unknown

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6784..7413
DNA (630bp) protein (210aa)
Tripartite ATP-independent periplasmic transporter DctQ component id=4714190 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
tripartite ATP-independent periplasmic transporter DctQ component
08E140C01_scaffold_770_curated_8
unknown

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7415..8692
DNA (1278bp) protein (426aa)
TRAP dicarboxylate transporter, DctM subunit id=4714191 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
TRAP dicarboxylate transporter subunit DctM rbh
08E140C01_scaffold_770_curated_9
unknown

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8717..9454
DNA (738bp) protein (246aa)
Putative uncharacterized protein id=4714192 bin=GWC2_Spirochaete_52_13 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_770_curated_10
unknown

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9478..10653
DNA (1176bp) protein (392aa)
creatinase; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] rbh
Creatinase id=4714193 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_770_curated_11
unknown

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10658..11656
DNA (999bp) protein (333aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19] rbh
Pyridoxal-5'-phosphate-dependent protein beta subunit id=4714194 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_770_curated_12
unknown

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11653..12651
DNA (999bp) protein (333aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] rbh
Ornithine cyclodeaminase id=4714195 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_770_curated_13
unknown

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12670..13839
DNA (1170bp) protein (390aa)
Creatinase id=4714222 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
creatinase rbh
08E140C01_scaffold_770_curated_14
unknown

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13856..15220
DNA (1365bp) protein (455aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4] rbh
Aspartokinase id=4714223 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_770_curated_15
unknown

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15330..16316
DNA (987bp) protein (329aa)
dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] rbh
Dihydroorotate dehydrogenase id=4714224 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_770_curated_16
unknown

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16322..17458
DNA (1137bp) protein (379aa)
Acyltransferase id=4714225 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
acyltransferase rbh
08E140C01_scaffold_770_curated_17
unknown

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17493..18182
DNA (690bp) protein (230aa)
id=4714226 bin=GWC2_Spirochaete_52_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_770_curated_18
unknown

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comp(18175..19986)
DNA (1812bp) protein (604aa)
DNA mismatch repair protein MutL id=4714227 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL rbh
08E140C01_scaffold_770_curated_19
unknown

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comp(20054..24823)
DNA (4770bp) protein (1590aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase id=4349365 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
5'-nucleotidase
08E140C01_scaffold_770_curated_20
unknown

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comp(24893..25690)
DNA (798bp) protein (266aa)
PP-loop domain protein id=4349364 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
PP-loop domain-containing protein rbh
08E140C01_scaffold_770_curated_21
unknown

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comp(25683..27047)
DNA (1365bp) protein (455aa)
Metal dependent phosphohydrolase id=4349363 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
metal dependent phosphohydrolase rbh
08E140C01_scaffold_770_curated_22
unknown

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27074..27529
DNA (456bp) protein (152aa)
id=4349362 bin=GWC2_Spirochaete_52_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_770_curated_trna_1
unknown

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27629..27701
DNA (73bp)
transferRNA
08E140C01_scaffold_770_curated_23
unknown

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27871..28647
DNA (777bp) protein (259aa)
Uncharacterized protein id=4349361 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_770_curated_24
unknown

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28650..29204
DNA (555bp) protein (185aa)
adenylate cyclase; K05873 adenylate cyclase, class 2 [EC:4.6.1.1]
Adenylate cyclase id=4349360 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_770_curated_25
unknown

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29214..29489
DNA (276bp) protein (92aa)
foldase protein PrsA (EC:5.2.1.8); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
foldase protein PrsA id=4349359 bin=GWC2_Spirochaete_52_13 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_770_curated_26
unknown

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comp(29493..30278)
DNA (786bp) protein (262aa)
iron-chelate-transporting ATPase (EC:3.6.3.34); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Iron-chelate-transporting ATPase id=4349358 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_770_curated_27
unknown

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comp(30278..31306)
DNA (1029bp) protein (343aa)
ABC-type transporter, integral membrane subunit id=4349357 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
iron ABC transporter transmembrane protein; K02015 iron complex transport system permease protein
08E140C01_scaffold_770_curated_28
unknown

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comp(31309..32241)
DNA (933bp) protein (311aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component id=4349356 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein; K02016 iron complex transport system substrate-binding protein
08E140C01_scaffold_770_curated_29
unknown

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32312..32548
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying items 1-30 of 56 in total

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