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08E140C01_scaffold_1021_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_1021_curated_1

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comp(2..706)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D6Q2_9BACT
BerA-like protein
Uncharacterized protein {ECO:0000313|EMBL:EKD89183.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
08E140C01_scaffold_1021_curated_2
Dehalogenimonas lykanthroporepellens, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(693..896)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3F6_DEHLB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ25475.1}; TaxID=552811 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061; / BL-DC-9).;"
08E140C01_scaffold_1021_curated_3
unknown

Not on your lists

comp(899..2188)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JST1_HALH3
hypothetical protein; K06889
08E140C01_scaffold_1021_curated_4
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2269..3177)
DNA (909bp) protein (303aa)
Uncharacterized protein {ECO:0000313|EMBL:EZH74112.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=4167620 bin=GWC2_Clostridiales_40_7 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
08E140C01_scaffold_1021_curated_5
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

3401..4666
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DYA7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDA89884.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
Predicted ATPase (AAA+ superfamily) rbh
08E140C01_scaffold_1021_curated_6
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4809..5306)
DNA (498bp) protein (166aa)
Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D5R2_PAESJ
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACT02607.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
08E140C01_scaffold_1021_curated_7
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5416..6570)
DNA (1155bp) protein (385aa)
Peptidase n=1 Tax=Clostridium intestinale URNW RepID=U2PZ70_9CLOT rbh
Peptidase {ECO:0000313|EMBL:ERK29054.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
peptidase dimerization domain-containing protein rbh
08E140C01_scaffold_1021_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6590..7798)
DNA (1209bp) protein (403aa)
Peptidase M24 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F890_CONWI
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ADB48960.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
08E140C01_scaffold_1021_curated_9
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(7923..8966)
DNA (1044bp) protein (348aa)
TRAP dicarboxylate transporter DctP subunit n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PZQ6_9FIRM
TRAP dicarboxylate transporter DctP subunit {ECO:0000313|EMBL:CDC29000.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
TRAP dicarboxylate transporter subunit DctP
08E140C01_scaffold_1021_curated_10
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(9041..10318)
DNA (1278bp) protein (426aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H6K3_ILYPC rbh
TRAP dicarboxylate transporter subunit DctM rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ADO81888.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
08E140C01_scaffold_1021_curated_11
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(10308..10838)
DNA (531bp) protein (177aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H6K2_ILYPC
tripartite AtP-independent periplasmic transporter subunit DctQ
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADO81887.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
08E140C01_scaffold_1021_curated_12
unknown

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11264..12541
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037E0CCB rbh
hypothetical protein rbh
08E140C01_scaffold_1021_curated_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12808..13797)
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57449.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
08E140C01_scaffold_1021_curated_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13800..14537)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57451.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
glycerophosphoryl diester phosphodiesterase
08E140C01_scaffold_1021_curated_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14549..15643)
DNA (1095bp) protein (365aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20) rbh
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM33_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHI57452.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
08E140C01_scaffold_1021_curated_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15640..16488)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM34_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHI57453.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter integral membrane protein; K02026 multiple sugar transport system permease protein
08E140C01_scaffold_1021_curated_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16489..17370)
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM35_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHI57454.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter integral membrane protein; K02025 multiple sugar transport system permease protein
08E140C01_scaffold_1021_curated_18
unknown

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comp(17463..17624)
DNA (162bp) protein (54aa)

This feature has no annotations

08E140C01_scaffold_1021_curated_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17621..18970)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X358_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY90136.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
08E140C01_scaffold_1021_curated_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19158..19931
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57457.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hydrolase
08E140C01_scaffold_1021_curated_21
Gracilibacillus boraciitolerans, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20070..20768)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D980
Uncharacterized protein {ECO:0000313|EMBL:GAE94726.1}; TaxID=1298598 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus boraciitolerans JCM 21714.;"
08E140C01_scaffold_1021_curated_22
Gracilibacillus boraciitolerans, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(20758..21639)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A1Q3_NATTJ rbh
Uncharacterized protein {ECO:0000313|EMBL:GAE94725.1}; TaxID=1298598 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus boraciitolerans JCM 21714.;"
hypothetical protein rbh
08E140C01_scaffold_1021_curated_23
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21617..21982)
DNA (366bp) protein (122aa)
XRE family transcriptional regulator n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D97E
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACB86101.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
08E140C01_scaffold_1021_curated_24
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22383..23228)
DNA (846bp) protein (282aa)
Transposase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QWD5_SPHPG rbh
transposase rbh
Transposase {ECO:0000313|EMBL:AEV29433.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
08E140C01_scaffold_1021_curated_25
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23233..24360)
DNA (1128bp) protein (376aa)
Putative Rossmann fold nucleotide-binding protein involved in DNA uptake n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QWD6_SPHPG rbh
putative Rossmann fold nucleotide-binding protein involved in DNA uptake; K04096 DNA processing protein rbh
Putative Rossmann fold nucleotide-binding protein involved in DNA uptake {ECO:0000313|EMBL:AEV29434.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
08E140C01_scaffold_1021_curated_26
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(24353..25885)
DNA (1533bp) protein (511aa)
Mg chelatase-related protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QWD7_SPHPG rbh
Mg chelatase-like protein; K07391 magnesium chelatase family protein rbh
Mg chelatase-related protein {ECO:0000313|EMBL:AEV29435.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
08E140C01_scaffold_1021_curated_27
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26279..27334
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L9B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62850.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
08E140C01_scaffold_1021_curated_28
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

27331..28161
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EBN0_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDA97948.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
08E140C01_scaffold_1021_curated_29
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28556..28882)
DNA (327bp) protein (109aa)
DNA polymerase beta domain protein region n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RY07_SPHGB
DNA polymerase beta domain-containing protein region
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ADY12431.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
08E140C01_scaffold_1021_curated_30
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28866..29294)
DNA (429bp) protein (143aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RY08_SPHGB
nucleotidyltransferase substrate binding protein
Nucleotidyltransferase substrate binding protein, HI0074 family {ECO:0000313|EMBL:ADY12432.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Displaying items 1-30 of 42 in total

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