ggKbase home page

08E140C01_scaffold_877_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_877_curated_1
unknown

Not on your lists

comp(114..728)
DNA (615bp) protein (205aa)
BH0988 protein id=4653970 bin=GWC2_Spirochaete_52_13 species=Bacillus halodurans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_877_curated_2
unknown

Not on your lists

comp(897..2561)
DNA (1665bp) protein (555aa)
araB; ribulokinase (EC:2.7.1.16); K00853 L-ribulokinase [EC:2.7.1.16] rbh
Ribulokinase id=4653971 bin=GWC2_Spirochaete_52_13 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_877_curated_3
unknown

Not on your lists

comp(2675..3253)
DNA (579bp) protein (193aa)
rimJ; ribosomal-protein-alanine acetyltransferase RimJ (EC:2.3.1.128); K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Ribosomal-protein-S5-alanine N-acetyltransferase id=4653972 bin=GWC2_Spirochaete_52_13 species=unknown genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_877_curated_4
unknown

Not on your lists

comp(3305..3841)
DNA (537bp) protein (179aa)
hypothetical protein PsR81_22689 id=4653973 bin=GWC2_Spirochaete_52_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_877_curated_5
unknown

Not on your lists

comp(3898..4377)
DNA (480bp) protein (160aa)
Putative uncharacterized protein id=4653974 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_877_curated_6
unknown

Not on your lists

4980..5387
DNA (408bp) protein (136aa)
Putative uncharacterized protein id=4653975 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_877_curated_7
unknown

Not on your lists

comp(5556..6182)
DNA (627bp) protein (209aa)
Response regulator with a HTH DNA-binding domain id=4578167 bin=GWF2_Lentisphaerae_57_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
response regulator
08E140C01_scaffold_877_curated_8
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6196..7683)
DNA (1488bp) protein (496aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Putative Histidine kinase {ECO:0000313|EMBL:CCE24551.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCE24551.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W4Y0_9CYAN
08E140C01_scaffold_877_curated_9
unknown

Not on your lists

8754..9104
DNA (351bp) protein (117aa)
id=2576484 bin=GWC2_Spirochaete_52_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_877_curated_10
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9302..12562
DNA (3261bp) protein (1087aa)
PAS/PAC domain protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2CXX3_9BACT rbh
PAS/PAC domain protein {ECO:0000313|EMBL:EOZ92017.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
signal transduction histidine kinase-like protein rbh
08E140C01_scaffold_877_curated_11
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12540..13589
DNA (1050bp) protein (350aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DRA4_HALPG
response regulator receiver modulated metal dependent phosphohydrolase; K07814 putative two-component system response regulator
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:ADO77010.1}; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL).;"
08E140C01_scaffold_877_curated_12
unknown

Not on your lists

13680..14255
DNA (576bp) protein (192aa)
Putative uncharacterized protein id=4374984 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_877_curated_13
unknown

Not on your lists

comp(14262..15440)
DNA (1179bp) protein (393aa)
Iron-containing alcohol dehydrogenase id=4374981 bin=GWC2_Spirochaete_52_13 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
iron-containing alcohol dehydrogenase rbh
08E140C01_scaffold_877_curated_14
unknown

Not on your lists

comp(15495..15989)
DNA (495bp) protein (165aa)
Uncharacterized protein id=4374980 bin=GWC2_Spirochaete_52_13 species=Rhizopus delemar genus=Rhizopus taxon_order=Mucorales taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_877_curated_15
unknown

Not on your lists

16085..17083
DNA (999bp) protein (333aa)
ATP-grasp enzyme, D-alanine-D-alanine ligase id=4374979 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
ATP-grasp enzyme, D-alanine-D-alanine ligase rbh
08E140C01_scaffold_877_curated_16
unknown

Not on your lists

comp(17078..17533)
DNA (456bp) protein (152aa)
Acetyltransferase id=4374978 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
acetyltransferase
08E140C01_scaffold_877_curated_17
unknown

Not on your lists

17656..18786
DNA (1131bp) protein (377aa)
Methicillin resistance protein id=4374977 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
methicillin resistance protein rbh
08E140C01_scaffold_877_curated_18
unknown

Not on your lists

18882..21401
DNA (2520bp) protein (840aa)
Putative RND superfamily exporter id=4374976 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
putative RND superfamily exporter rbh
08E140C01_scaffold_877_curated_19
unknown

Not on your lists

21398..22186
DNA (789bp) protein (263aa)
Putative uncharacterized protein id=4374975 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein rbh
08E140C01_scaffold_877_curated_20
unknown

Not on your lists

22183..23583
DNA (1401bp) protein (467aa)
Putative uncharacterized protein id=4374974 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein rbh
08E140C01_scaffold_877_curated_21
unknown

Not on your lists

23606..24127
DNA (522bp) protein (174aa)
hypothetical protein AlS89_00404 id=4374973 bin=GWC2_Spirochaete_52_13 species=Microbulbifer agarilyticus genus=Microbulbifer taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_877_curated_22
unknown

Not on your lists

24228..25181
DNA (954bp) protein (318aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=4374972 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain rbh
08E140C01_scaffold_877_curated_23
unknown

Not on your lists

comp(25167..28415)
DNA (3249bp) protein (1083aa)
Exonuclease SbcC id=4374971 bin=GWC2_Spirochaete_52_13 species=Waddlia chondrophila genus=Waddlia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
SMC domain-containing protein; K03546 exonuclease SbcC rbh
08E140C01_scaffold_877_curated_24
unknown

Not on your lists

comp(28412..29641)
DNA (1230bp) protein (410aa)
Exodeoxyribonuclease I subunit D id=4374970 bin=GWC2_Spirochaete_52_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
exonuclease rbh
08E140C01_scaffold_877_curated_25
unknown

Not on your lists

comp(29638..30183)
DNA (546bp) protein (182aa)
Transcription antiterminator id=4374969 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
transcription antiterminator; K02601 transcriptional antiterminator NusG
08E140C01_scaffold_877_curated_26
unknown

Not on your lists

comp(30180..32021)
DNA (1842bp) protein (614aa)
Putative nucleoside-diphosphate sugar epimerase id=4374968 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
putative nucleoside-diphosphate sugar epimerase rbh
08E140C01_scaffold_877_curated_27
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(32204..33403)
DNA (1200bp) protein (400aa)
aspartate transaminase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] rbh
Aspartate transaminase {ECO:0000313|EMBL:ADY13848.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ADY13848.1};; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Aspartate transaminase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RTT3_SPHGB rbh
08E140C01_scaffold_877_curated_28
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(33499..34791)
DNA (1293bp) protein (431aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] rbh
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ADY13849.1}; EC=2.7.6.1 {ECO:0000313|EMBL:ADY13849.1};; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RTT4_SPHGB rbh
08E140C01_scaffold_877_curated_29
unknown

Not on your lists

35198..35737
DNA (540bp) protein (180aa)
Putative uncharacterized protein id=4883751 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_877_curated_30
unknown

Not on your lists

comp(35741..37111)
DNA (1371bp) protein (457aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] rbh
Argininosuccinate lyase id=4883750 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Displaying items 1-30 of 51 in total

View Taxonomy