ggKbase home page

08E140C01_scaffold_3753_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_3753_curated_1
unknown

Not on your lists

comp(133..978)
DNA (846bp) protein (282aa)
Putative uncharacterized protein id=2177746 bin=GWB2_Clostridiales_37_7 species=Faecalibacterium prausnitzii genus=Faecalibacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
Domain of unknown function (DUF1814). rbh
08E140C01_scaffold_3753_curated_2
unknown

Not on your lists

comp(975..1595)
DNA (621bp) protein (207aa)
Abortive infection protein AbiGI id=2177747 bin=GWB2_Clostridiales_37_7 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
Abortive infection protein AbiGI
08E140C01_scaffold_3753_curated_3
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2279..2842)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000368D48B
Transposase, IS116/IS110/IS902 family {ECO:0000313|EMBL:EFF69817.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
IS110 family transposase
08E140C01_scaffold_3753_curated_4

Not on your lists

comp(2900..3394)
DNA (495bp) protein (165aa)
transposase n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B385D9
Uncultured bacterium extrachromosomal DNA RGI01564 {ECO:0000313|EMBL:CDL66546.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase IS116/IS110/IS902 family protein
08E140C01_scaffold_3753_curated_5
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3881..4861)
DNA (981bp) protein (327aa)
Putative ribose ABC transporter permease protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Z6G0_9FIRM rbh
Putative ribose ABC transporter permease protein {ECO:0000313|EMBL:ESL02515.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
rbsC; ribose transport system permease RbsC; K10440 ribose transport system permease protein
08E140C01_scaffold_3753_curated_6
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(4848..6392)
DNA (1545bp) protein (515aa)
ABC transporter-like protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
D-ribose transporter ATP binding protein n=1 Tax=Psychromonas hadalis RepID=UPI0003B690F3
08E140C01_scaffold_3753_curated_7
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6392..7177)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0H1K2_STRA9
Cyclase {ECO:0000313|EMBL:EXU91634.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
cyclase family protein
08E140C01_scaffold_3753_curated_8
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7254..8234)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T4J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68338.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
ribose ABC transporter substrate-binding protein; K02058 simple sugar transport system substrate-binding protein
08E140C01_scaffold_3753_curated_9
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8404..9753
DNA (1350bp) protein (450aa)
Transcriptional regulatory protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RPA2_SPITD rbh
transcriptional regulatory protein rbh
Transcriptional regulatory protein {ECO:0000313|EMBL:ADN01296.1}; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1).;"
08E140C01_scaffold_3753_curated_10
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9750..11552
DNA (1803bp) protein (601aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1).;"
Sensory histidine kinase in two-component regulatory system with AtoC n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RPA1_SPITD rbh
sensory histidine kinase in two-component regulatory system with AtoC rbh
08E140C01_scaffold_3753_curated_11
unknown

Not on your lists

comp(11939..12595)
DNA (657bp) protein (219aa)
Putative uncharacterized protein id=2045328 bin=GWE2_Spirochaete_31_10 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
hypothetical protein
08E140C01_scaffold_3753_curated_12
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12579..13943)
DNA (1365bp) protein (455aa)
Abortive phage resistance protein-like protein n=1 Tax=Galbibacter marinus RepID=K2PPC5_9FLAO rbh
Abortive phage resistance protein-like protein {ECO:0000313|EMBL:EKF54365.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
abortive phage resistance protein-like protein; K06926
08E140C01_scaffold_3753_curated_13
unknown

Not on your lists

comp(13961..14830)
DNA (870bp) protein (290aa)
signal transduction protein (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B7Z8_9CLOT
Displaying 13 items

View Taxonomy