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08E140C01_scaffold_419_curated

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_419_curated_1
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..300
DNA (300bp) protein (100aa)
Transposase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EC02_THECK
transposase
Transposase {ECO:0000313|EMBL:AGA57317.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
08E140C01_scaffold_419_curated_2
unknown

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comp(559..2073)
DNA (1515bp) protein (505aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2]
Putative dihydropyrimidinase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5I5_9CLOT rbh
08E140C01_scaffold_419_curated_3
unknown

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comp(2250..3176)
DNA (927bp) protein (309aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5I4_9CLOT rbh
inner-membrane translocator rbh
08E140C01_scaffold_419_curated_4
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3173..4294)
DNA (1122bp) protein (374aa)
Inner-membrane translocator n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8D4_SPISS rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:ADK79278.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
08E140C01_scaffold_419_curated_5
unknown

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comp(4291..5811)
DNA (1521bp) protein (507aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5H5_9CLOT rbh
ABC transporter rbh
08E140C01_scaffold_419_curated_6
unknown

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comp(5942..6904)
DNA (963bp) protein (321aa)
Basic membrane protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5H4_9CLOT rbh
basic membrane lipoprotein; K07335 basic membrane protein A and related proteins rbh
08E140C01_scaffold_419_curated_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7156..7701)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X6R9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22244.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
AAA ATPase; K07133
08E140C01_scaffold_419_curated_8
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(7843..8934)
DNA (1092bp) protein (364aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RUV8_SPHGB rbh
periplasmic binding protein/LacI transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ADY12536.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
08E140C01_scaffold_419_curated_9
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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9215..10231
DNA (1017bp) protein (339aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BWG5_DESAD rbh
TRAP dicarboxylate transporter-DctP subunit rbh
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:ACS78409.1}; Flags: Precursor;; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /; VKM B-1763).;"
08E140C01_scaffold_419_curated_10
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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10297..10800
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI00037A2AFF
tripartite ATP-independent periplasmic transporter DctQ component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ACS78408.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /; VKM B-1763).;"
08E140C01_scaffold_419_curated_11
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10760..12091
DNA (1332bp) protein (444aa)
C4-dicarboxylate ABC transporter n=1 Tax=Spirochaeta alkalica RepID=UPI000366A083 rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:ESQ12943.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;" source="uncultured Desulfofustis sp. PB-SRB1.;"
TRAP dicarboxylate transporter subunit DctM rbh
08E140C01_scaffold_419_curated_12
unknown

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12120..12845
DNA (726bp) protein (242aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphoryl diester phosphodiesterase family protein id=2887157 bin=GWC2_Spirochaete_52_13 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_419_curated_13
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(13340..14122)
DNA (783bp) protein (261aa)
Transcriptional regulator, DeoR family n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R2C7_SPISS
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ADK82487.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
08E140C01_scaffold_419_curated_14
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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14288..15154
DNA (867bp) protein (289aa)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ERF59773.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ERF59773.1};; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13) rbh
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U1FJ46_TRESO rbh
08E140C01_scaffold_419_curated_15
unknown

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15181..15618
DNA (438bp) protein (146aa)
Transketolase subunit A id=3662843 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
08E140C01_scaffold_419_curated_16
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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15634..16572
DNA (939bp) protein (313aa)
Carbohydrate kinase, PfkB family n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U1FKA6_TRESO rbh
Carbohydrate kinase, PfkB family {ECO:0000313|EMBL:ERF59791.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
PfkB family carbohydrate kinase
08E140C01_scaffold_419_curated_17
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16569..17612
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3KS94_TRESO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPF27344.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
Fe3+ ABC transporter periplasmic protein
08E140C01_scaffold_419_curated_18
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17714..18811
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JQE4_TRESO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPF27345.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
Fe(3+) ions import ATP-binding protein FbpC rbh
08E140C01_scaffold_419_curated_19
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

18819..20477
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JS90_TRESO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPF27346.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
iron ABC transporter permease; K02011 iron(III) transport system permease protein rbh
08E140C01_scaffold_419_curated_20
unknown

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20672..20872
DNA (201bp) protein (67aa)
Putative uncharacterized protein id=2887154 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_419_curated_trna_4
unknown

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comp(21282..21355)
DNA (74bp)
transferRNA
08E140C01_scaffold_419_curated_21
unknown

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comp(21504..22145)
DNA (642bp) protein (214aa)
Rare lipoprotein A id=2887149 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
rare lipoprotein A; K03642 rare lipoprotein A
08E140C01_scaffold_419_curated_22
unknown

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22174..23835
DNA (1662bp) protein (554aa)
lysyl-tRNA synthetase; K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] rbh
Lysine--tRNA ligase id=2887143 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_419_curated_23
unknown

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comp(23860..24807)
DNA (948bp) protein (316aa)
GTPase Era id=2887140 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
GTP-binding protein Era; K03595 GTP-binding protein Era rbh
08E140C01_scaffold_419_curated_24
unknown

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24868..25437
DNA (570bp) protein (190aa)
protease subunit of ATP-dependent protease; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit id=2887138 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_419_curated_25
unknown

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25496..27709
DNA (2214bp) protein (738aa)
Major Facilitator Superfamily transporter id=2887136 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Major Facilitator Superfamily transporter rbh
08E140C01_scaffold_419_curated_26
unknown

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27803..28867
DNA (1065bp) protein (355aa)
Endonuclease/exonuclease/phosphatase id=2887133 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
endonuclease/exonuclease/phosphatase
08E140C01_scaffold_419_curated_27
unknown

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comp(28873..29511)
DNA (639bp) protein (213aa)
Redox-sensing transcriptional repressor rex id=2887131 bin=GWC2_Spirochaete_52_13 species=unknown genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
redox-sensing transcriptional repressor rex; K01926 redox-sensing transcriptional repressor rbh
08E140C01_scaffold_419_curated_28
unknown

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29686..30162
DNA (477bp) protein (159aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
NADH-quinone oxidoreductase, E subunit id=2887129 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_419_curated_29
unknown

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30175..30747
DNA (573bp) protein (191aa)
Histidine kinase id=2887127 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
histidine kinase
Displaying items 1-30 of 98 in total

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