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bjp_ig2069_scaffold_338

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2069_scaffold_338_1
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..99
DNA (99bp) protein (33aa)
Elongation factor Tu n=1 Tax=Burkholderia pseudomallei MSHR305 RepID=S5PBA0_BURPE
tuf; translation elongation factor Tu
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=243160 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderi
bjp_ig2069_scaffold_338_2
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


578..1246
DNA (669bp) protein (223aa)
50S ribosomal protein L3 n=1 Tax=uncultured bacterium RepID=K2G2J3_9BACT
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfurita
bjp_ig2069_scaffold_338_3
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1246..1866
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VQP8_9BURK
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
rplD; 50S ribosomal protein L4
bjp_ig2069_scaffold_338_4
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1863..2177
DNA (315bp) protein (105aa)
50S ribosomal protein L23 n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=RL23_AROAE
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000313|EMBL:AJP49035.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="
bjp_ig2069_scaffold_338_5
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2178..3005
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=1 Tax=Azoarcus sp. (strain BH72) RepID=RL2_AZOSB rbh
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hyd
bjp_ig2069_scaffold_338_6
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3643..4515
DNA (873bp) protein (291aa)
30S ribosomal protein S3 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS3_DECAR
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
rpsC; 30S ribosomal protein S3
bjp_ig2069_scaffold_338_7
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6305..6844
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035C61F8
rplE; 50S ribosomal protein L5
rplE; 50S ribosomal protein L5 Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
bjp_ig2069_scaffold_338_8
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7173..7568
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036B2A81
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hyd
bjp_ig2069_scaffold_338_9
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7580..8113
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6ZEP9_9RHOO
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
rplF; 50S ribosomal protein L6
bjp_ig2069_scaffold_338_10
unknown

Not on your lists

comp(8411..8788)
DNA (378bp) protein (126aa)

This feature has no annotations

bjp_ig2069_scaffold_338_11
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9689..11017
DNA (1329bp) protein (443aa)
preprotein translocase subunit SecY n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000366A597
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
secY; preprotein translocase subunit SecY
bjp_ig2069_scaffold_338_12
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12256..12885
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=2 Tax=Thauera RepID=N6Y4B7_9RHOO
30S ribosomal protein S4 rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000313|EMBL:AJP49015.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="R
bjp_ig2069_scaffold_338_13
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12949..13926
DNA (978bp) protein (326aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:AJP49014.1}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rul
DNA-directed RNA polymerase subunit alpha n=1 Tax=Azoarcus sp. (strain BH72) RepID=RPOA_AZOSB
bjp_ig2069_scaffold_338_14
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14019..14414
DNA (396bp) protein (132aa)
50S ribosomal protein L17 n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036F0F8D
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source
bjp_ig2069_scaffold_338_15
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14501..15793)
DNA (1293bp) protein (431aa)
sulfate adenylyltransferase, large subunit (EC:2.7.7.4); K00956 sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Sulfate adenylyltransferase, large subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM15_ACCPU
sulfate adenylyltransferase
bjp_ig2069_scaffold_338_16
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15793..16719)
DNA (927bp) protein (309aa)
cysD; sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732, ECO:0000313|EMBL:CAL93046.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria
Putative sulfate adenylyltransferase subunit 2 n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2J1_AZOSB rbh
bjp_ig2069_scaffold_338_17
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16716..17465)
DNA (750bp) protein (250aa)
thioredoxin-dependent adenylylsulfate APS reductase; K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8] Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
phosphoadenosine phosphosulfate reductase n=1 Tax=Methyloversatilis universalis RepID=UPI000361A15A
thioredoxin-dependent adenylylsulfate APS reductase
bjp_ig2069_scaffold_338_18
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17478..17984)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035D1982
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP49011.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
bjp_ig2069_scaffold_338_19
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17977..19668)
DNA (1692bp) protein (564aa)
Nitrite and sulfite reductase 4Fe-4S region n=1 Tax=Thauera aminoaromatica S2 RepID=N6Z667_9RHOO
sulfite reductase rbh
Sulfite reductase {ECO:0000313|EMBL:AJP49010.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
bjp_ig2069_scaffold_338_20
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19682..20470)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IXN4_9GAMM
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP49009.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
bjp_ig2069_scaffold_338_21
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20550..21491
DNA (942bp) protein (314aa)
Transcriptional regulator n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI06_AZOSU
cysB; CysB family transcriptional regulator
CysB family transcriptional regulator {ECO:0000313|EMBL:AJP49008.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacter
bjp_ig2069_scaffold_338_22
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21581..22153)
DNA (573bp) protein (191aa)
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKX7_AZOSU
response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein {ECO:0000313|EMBL:AEV25582.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodoc
bjp_ig2069_scaffold_338_23
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22150..23505)
DNA (1356bp) protein (452aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIC2_ACCPU rbh
integral membrane sensor signal transduction histidine kinase
bjp_ig2069_scaffold_338_24
unknown

Not on your lists

comp(23602..23694)
DNA (93bp) protein (31aa)

This feature has no annotations

bjp_ig2069_scaffold_338_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23835..24380)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWZ1_VARPE
Variovorax paradoxus strain MEDvA23 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36218.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
hypothetical protein
bjp_ig2069_scaffold_338_26
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24598..26415)
DNA (1818bp) protein (606aa)
Composite transport ATP-binding permase n=1 Tax=Thauera sp. 63 RepID=N6XCH1_9RHOO rbh
atm1; ABC transporter, Putative xenobiotic-transporting ATPase
ABC transporter, Putative xenobiotic-transporting ATPase {ECO:0000313|EMBL:BAO27886.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea
bjp_ig2069_scaffold_338_27
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26525..27694
DNA (1170bp) protein (390aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUR0_ACCPU rbh
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACV36305.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis
bjp_ig2069_scaffold_338_28
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27859..28257
DNA (399bp) protein (133aa)
Acyl-CoA hydrolase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNE7_AZOSU
yciA; acyl-CoA thioesterase Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
acyl-CoA hydrolase
bjp_ig2069_scaffold_338_29
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28275..28874)
DNA (600bp) protein (200aa)
UPF0307 protein azo2793 n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K9A4_AZOSB
yjgA; hypothetical protein; K09889 ribosome-associated protein Tax=GWA2_Rhodocyclales_65_20_curated
hypothetical protein
bjp_ig2069_scaffold_338_30
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28922..30259
DNA (1338bp) protein (446aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IH7_DECAR
microcin-processing peptidase 1; K03592 PmbA protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
pmbA; peptidase PmbA rbh
Displaying items 1-30 of 91 in total

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