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bjp_ig2069_scaffold_261_curated

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2069_scaffold_261_curated_1
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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2..355
DNA (354bp) protein (118aa)
Phosphoesterase family n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETN6_9BACT
Phosphoesterase family
Phosphoesterase family {ECO:0000313|EMBL:CCW34565.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
bjp_ig2069_scaffold_261_curated_2
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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456..1910
DNA (1455bp) protein (485aa)
Lipoprotein, putative n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E7W1_GEOBB rbh
lipoprotein rbh
Lipoprotein, putative {ECO:0000313|EMBL:ACH38497.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
bjp_ig2069_scaffold_261_curated_3
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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1938..3389
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GGI8_METPE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACL16243.1}; Flags: Precursor;; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
bjp_ig2069_scaffold_261_curated_4
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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3496..5289
DNA (1794bp) protein (598aa)
Metallophosphoesterase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SZS1_META2 rbh
Metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:CCE25521.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
bjp_ig2069_scaffold_261_curated_5
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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5325..5747
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XTW7_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH73632.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
bjp_ig2069_scaffold_261_curated_trna_1
unknown

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5998..6069
DNA (72bp)
transferRNA
bjp_ig2069_scaffold_261_curated_6
unknown

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6298..6570
DNA (273bp) protein (91aa)

This feature has no annotations

bjp_ig2069_scaffold_261_curated_7
unknown

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6790..7575
DNA (786bp) protein (262aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00046 gluconate 5-dehydrogenase [EC:1.1.1.69]
Short-chain dehydrogenase/reductase SDR id=3913921 bin=GWC2_Syntrophobacterales_56_13 species=Alicyclobacillus hesperidum genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_261_curated_8
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7685..8122
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4EQ45_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESP62881.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
hypothetical protein
bjp_ig2069_scaffold_261_curated_9
unknown

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8714..9010
DNA (297bp) protein (99aa)

This feature has no annotations

bjp_ig2069_scaffold_261_curated_10
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9007..9558
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QEX4_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPX59889.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
bjp_ig2069_scaffold_261_curated_11
unknown

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comp(9555..9803)
DNA (249bp) protein (83aa)
nucleotidyltransferase/DNA polymerase protein; K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV id=3737748 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_261_curated_12
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10115..11599
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EE94_GEOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH39239.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
bjp_ig2069_scaffold_261_curated_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11658..12635
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCE9_GEOUR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ24753.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
bjp_ig2069_scaffold_261_curated_14
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(12991..14058)
DNA (1068bp) protein (356aa)
DRTGG domain protein n=2 Tax=uncultured candidate division OP1 bacterium RepID=H5SV47_9BACT
DRTGG domain protein {ECO:0000313|EMBL:BAL59476.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
hypothetical protein
bjp_ig2069_scaffold_261_curated_15
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

comp(14055..16190)
DNA (2136bp) protein (712aa)
acetyl coenzyme A synthetase (ADP forming), alpha domain protein; K01905 acetyl-CoA synthetase (ADP-forming) [EC:6.2.1.13] rbh
CoA-binding domain protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SC94_9BACT rbh
CoA-binding domain-containing protein {ECO:0000313|EMBL:BAL53780.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
bjp_ig2069_scaffold_261_curated_16
unknown

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comp(16462..18015)
DNA (1554bp) protein (518aa)
putative with similarity to BchE, but NOT Mg-protoporphyrin monomethyl ester cyclase (anaerobic) id=24406630 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
radical SAM domain-containing protein rbh
bjp_ig2069_scaffold_261_curated_17
unknown

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18362..19078
DNA (717bp) protein (239aa)

This feature has no annotations

bjp_ig2069_scaffold_261_curated_18
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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19075..19668
DNA (594bp) protein (198aa)
6-o-methylguanine DNA methyltransferase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRJ6_SYNAS
6-O-methylguanine-DNA methyltransferase
6-o-methylguanine DNA methyltransferase {ECO:0000313|EMBL:ABC76705.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_261_curated_19
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19827..21461
DNA (1635bp) protein (545aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XXJ2_9FIRM rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EHQ91198.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
AMP-dependent synthetase and ligase rbh
bjp_ig2069_scaffold_261_curated_20

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21482..21913
DNA (432bp) protein (144aa)
ACT domain containing protein n=1 Tax=sediment metagenome RepID=D9PEZ9_9ZZZZ
ACT domain containing protein {ECO:0000313|EMBL:EFK97866.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
ACT domain-containing protein
bjp_ig2069_scaffold_261_curated_21

Not on your lists

22047..22481
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PI28_9ZZZZ
Marine sediment metagenome DNA, contig: S12H4_L03024 {ECO:0000313|EMBL:GAI74949.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
bjp_ig2069_scaffold_261_curated_22
unknown

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comp(22486..23196)
DNA (711bp) protein (237aa)
Phosphorylase family 2 protein id=4662296 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
phosphorylase family 2 protein
bjp_ig2069_scaffold_261_curated_23
unknown

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23437..23766
DNA (330bp) protein (110aa)
Thioredoxin id=2808035 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
thioredoxin; K03671 thioredoxin 1
bjp_ig2069_scaffold_261_curated_24
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23796..24584
DNA (789bp) protein (263aa)
Lipoprotein, ComL family n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVG2_SYNAS
ComL family lipoprotein; K05807 putative lipoprotein
Lipoprotein, ComL family {ECO:0000313|EMBL:ABC78075.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_261_curated_25
unknown

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comp(24614..26185)
DNA (1572bp) protein (524aa)
Gluconate kinase id=4953663 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
gluconate kinase; K07028 rbh
bjp_ig2069_scaffold_261_curated_26
unknown

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26340..26990
DNA (651bp) protein (217aa)
Hypothetical lipoprotein id=3753910 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
lipoprotein; K09778 hypothetical protein
bjp_ig2069_scaffold_261_curated_27
unknown

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comp(27006..27647)
DNA (642bp) protein (214aa)
CheC, inhibitor of MCP methylation id=2061465 bin=GWB2_Desulfobacterales_56_26 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
inhibitor of MCP methylation CheC; K03410 chemotaxis protein CheC
bjp_ig2069_scaffold_261_curated_28
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(27651..28031)
DNA (381bp) protein (127aa)
Response regulator receiver protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AK57_PELPD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABK97727.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
bjp_ig2069_scaffold_261_curated_29
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(28139..29041)
DNA (903bp) protein (301aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AK55_PELPD rbh
PAS/PAC sensor-containing diguanylate cyclase rbh
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ABK97725.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
Displaying items 1-30 of 108 in total

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