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bjp_ig2069_scaffold_749_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2069_scaffold_749_curated_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..916
DNA (915bp) protein (305aa)
cobalamin biosynthesis protein CobT, partial n=1 Tax=Vibrio tasmaniensis RepID=UPI000378FF29
hypothetical protein; K07126
Uncharacterized protein {ECO:0000313|EMBL:ACE06544.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
bjp_ig2069_scaffold_749_curated_2
unknown

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comp(998..1204)
DNA (207bp) protein (69aa)

This feature has no annotations

bjp_ig2069_scaffold_749_curated_3
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1565..2473
DNA (909bp) protein (303aa)
glycyl-radical enzyme activating protein family; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] rbh
Pyruvate formate lyase activating enzyme {ECO:0000313|EMBL:ACL04273.1}; EC=1.97.1.4 {ECO:0000313|EMBL:ACL04273.1};; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
Pyruvate formate lyase activating enzyme n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFL3_DESAA rbh
bjp_ig2069_scaffold_749_curated_4
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2451..4832
DNA (2382bp) protein (794aa)
formate C-acetyltransferase; K00656 formate C-acetyltransferase [EC:2.3.1.54] rbh
Pyruvate formate lyase {ECO:0000313|EMBL:ACL04272.1}; EC=2.3.1.54 {ECO:0000313|EMBL:ACL04272.1};; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
Pyruvate formate lyase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFL2_DESAA rbh
bjp_ig2069_scaffold_749_curated_5
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4948..6591)
DNA (1644bp) protein (548aa)
60 kDa chaperonin 2 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=CH602_SYNAS rbh
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL rbh
60 kDa chaperonin 2 {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein 2 {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 2 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_749_curated_6
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6618..6908)
DNA (291bp) protein (97aa)
10 kDa chaperonin n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTG3_SYNAS
groES; co-chaperonin GroES; K04078 chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_749_curated_7
unknown

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comp(7057..8415)
DNA (1359bp) protein (453aa)
DNA repair protein radA id=4889174 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms rbh
bjp_ig2069_scaffold_749_curated_8
unknown

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comp(8402..8533)
DNA (132bp) protein (44aa)

This feature has no annotations

bjp_ig2069_scaffold_749_curated_9
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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8668..10365
DNA (1698bp) protein (566aa)
Response regulator n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=R9S3I7_SIMAS
response regulator
Response regulator {ECO:0000313|EMBL:AGN11362.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 /; SA1).;"
bjp_ig2069_scaffold_749_curated_10
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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10609..10881
DNA (273bp) protein (91aa)
WD40 domain protein beta Propeller n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPA0_ROSS1
WD40 domain-containing protein
WD40 domain protein beta Propeller {ECO:0000313|EMBL:ABQ88453.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
bjp_ig2069_scaffold_749_curated_11
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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10956..11870
DNA (915bp) protein (305aa)
WD40 domain protein beta Propeller n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPA0_ROSS1
WD40 domain-containing protein
WD40 domain protein beta Propeller {ECO:0000313|EMBL:ABQ88453.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
bjp_ig2069_scaffold_749_curated_12
unknown

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12262..12804
DNA (543bp) protein (181aa)

This feature has no annotations

bjp_ig2069_scaffold_749_curated_13
unknown

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12777..13367
DNA (591bp) protein (197aa)

This feature has no annotations

bjp_ig2069_scaffold_749_curated_14
unknown

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13580..14314
DNA (735bp) protein (245aa)

This feature has no annotations

bjp_ig2069_scaffold_749_curated_15
unknown

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14535..16013
DNA (1479bp) protein (493aa)
superfamily II DNA/RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] rbh
Superfamily II DNA and RNA helicases id=3908472 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_749_curated_16
unknown

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16234..17361
DNA (1128bp) protein (376aa)
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] rbh
Phosphoserine aminotransferase id=4013908 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_749_curated_17
unknown

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17379..18686
DNA (1308bp) protein (436aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] rbh
Adenylosuccinate synthetase id=4013912 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_749_curated_trna_1
unknown

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18749..18820
DNA (72bp)
transferRNA
bjp_ig2069_scaffold_749_curated_18
unknown

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19102..20262
DNA (1161bp) protein (387aa)
hypothetical protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
Phosphoglycerate dehydrogenase-like oxidoreductase id=3679470 bin=GWB1_CP_36_13 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
bjp_ig2069_scaffold_749_curated_19
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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20489..22279
DNA (1791bp) protein (597aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Smithella sp. ME-1 RepID=V4ENS5_9DELT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ESP62466.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
TPR repeat-containing protein
bjp_ig2069_scaffold_749_curated_20
unknown

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22978..23403
DNA (426bp) protein (142aa)
hypothetical protein; K02614 acyl-CoA thioesterase [EC:3.1.2.-]
Uncharacterized domain 1 id=4561083 bin=GWC2_Syntrophus__56_31 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_749_curated_21
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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23428..24105
DNA (678bp) protein (226aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIC3_SYNFM
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ABK17175.1}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
bjp_ig2069_scaffold_749_curated_22
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

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comp(24117..24596)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B8U4_TURPD
Protein of unknown function DUF2147
Uncharacterized protein {ECO:0000313|EMBL:AFM13701.1}; Flags: Precursor;; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H); (Leptospira parva).;"
bjp_ig2069_scaffold_749_curated_23
unknown

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24829..26049
DNA (1221bp) protein (407aa)
sugar phosphate permease n=3 Tax=unclassified Aminicenantes RepID=UPI0003B3EEF7 rbh
hypothetical protein rbh
bjp_ig2069_scaffold_749_curated_24
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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26169..28469
DNA (2301bp) protein (767aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q2X5_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EPX55634.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein rbh
bjp_ig2069_scaffold_749_curated_25
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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28748..29383
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZZ04_DESOH
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABW68777.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
bjp_ig2069_scaffold_749_curated_26
unknown

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29476..31077
DNA (1602bp) protein (534aa)
xylulose kinase id=1891964 bin=GWD2_Chloroflexi_49_16 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Carbohydrate kinase, FGGY rbh
bjp_ig2069_scaffold_749_curated_27
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

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31109..32518
DNA (1410bp) protein (470aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
glutamate-1-semialdehyde aminotransferase n=1 Tax=Pseudomonas sp. 45MFCol3.1 RepID=UPI0003725DE0 rbh
Aminotransferase class-III {ECO:0000313|EMBL:EHQ07903.1}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
bjp_ig2069_scaffold_749_curated_28
unknown

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32554..33897
DNA (1344bp) protein (448aa)
afu:AF1587 rbcL-1; ribulose bisphosphate carboxylase, large subunit (RbcL-1); K08965 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [EC:3.1.3.77] id=1241504 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
ribulose bisphosphate carboxylase-like protein rbh
bjp_ig2069_scaffold_749_curated_29
Thermotoga petrophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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33969..35093
DNA (1125bp) protein (375aa)
Uncharacterized protein n=2 Tax=Thermotoga RepID=A5IMK0_THEP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ47423.1}; Flags: Precursor;; TaxID=390874 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995).;"
Displaying items 1-30 of 34 in total

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