ggKbase home page

bjp_ig2069_scaffold_9_curated

Search features with annotation key words

Displaying items 1-30 of 722 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2069_scaffold_9_curated_1
unknown

Not on your lists

comp(1..198)
DNA (198bp) protein (66aa)

This feature has no annotations

bjp_ig2069_scaffold_9_curated_2
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217..1932)
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00036BD53B
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ESP62466.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
hypothetical protein
bjp_ig2069_scaffold_9_curated_3
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2160..2813
DNA (654bp) protein (218aa)
DedA family protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPM6_SYNAS rbh
dedA family protein; K03975 membrane-associated protein rbh
DedA family protein {ECO:0000313|EMBL:ABC76232.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_9_curated_4
unknown

Not on your lists

2827..3741
DNA (915bp) protein (305aa)
Hypothetical membrane protein id=2897313 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
bjp_ig2069_scaffold_9_curated_5
unknown

Not on your lists

3936..4697
DNA (762bp) protein (254aa)

This feature has no annotations

bjp_ig2069_scaffold_9_curated_6
unknown

Not on your lists

4921..5442
DNA (522bp) protein (174aa)

This feature has no annotations

bjp_ig2069_scaffold_9_curated_7
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5569..6096
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZVN7_DESOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW68224.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
bjp_ig2069_scaffold_9_curated_8
unknown

Not on your lists

6129..7088
DNA (960bp) protein (320aa)

This feature has no annotations

bjp_ig2069_scaffold_9_curated_9
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7211..7975
DNA (765bp) protein (255aa)
Peptidase C39 bacteriocin processing n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZVN9_DESOH
peptidase C39 bacteriocin processing; K06992
Peptidase C39 bacteriocin processing {ECO:0000313|EMBL:ABW68226.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
bjp_ig2069_scaffold_9_curated_10
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8044..8868)
DNA (825bp) protein (275aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] rbh
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:ABC76239.1}; EC=6.3.5.3 {ECO:0000313|EMBL:ABC76239.1};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Phosphoribosylformylglycinamidine synthase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPP2_SYNAS rbh
bjp_ig2069_scaffold_9_curated_11
unknown

Not on your lists

comp(8884..11865)
DNA (2982bp) protein (994aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] rbh
Phosphoribosylformylglycinamidine synthase 2 id=3925300 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_9_curated_12
unknown

Not on your lists

12109..13446
DNA (1338bp) protein (446aa)
hypothetical protein; K09760 DNA recombination protein RmuC id=16783895 bin=RBG_16_Aminicenantes_63_16_plus species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein rbh
bjp_ig2069_scaffold_9_curated_13
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13527..14972
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=281689 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfuromonas acetoxidans DSM 684.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX71_DESAC rbh
multi-sensor signal transduction histidine kinase rbh
bjp_ig2069_scaffold_9_curated_14
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15200..16342
DNA (1143bp) protein (381aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3F0_GEOUR rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABQ26318.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
bjp_ig2069_scaffold_9_curated_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16440..17324
DNA (885bp) protein (295aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3E9_GEOUR rbh
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABQ26317.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
bjp_ig2069_scaffold_9_curated_16
unknown

Not on your lists

17334..18368
DNA (1035bp) protein (345aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein rbh
Amino acid/amide ABC transporter membrane protein 2, HAAT family id=1965918 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
bjp_ig2069_scaffold_9_curated_17
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18355..19107
DNA (753bp) protein (251aa)
Branched-chain amino acid ABC transporter, ATP-binding protein n=2 Tax=Geobacter metallireducens RepID=Q39UM5_GEOMG rbh
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
Branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABB32049.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
bjp_ig2069_scaffold_9_curated_18
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19247..19990
DNA (744bp) protein (248aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3E5_GEOUR rbh
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABQ26313.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
bjp_ig2069_scaffold_9_curated_19
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20068..21369
DNA (1302bp) protein (434aa)
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] rbh
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Phenylacetate--CoA ligase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M235_GEODF rbh
bjp_ig2069_scaffold_9_curated_20
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21395..22429)
DNA (1035bp) protein (345aa)
biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] rbh
Biotin synthase {ECO:0000255|HAMAP-Rule:MF_01694}; EC=2.8.1.6 {ECO:0000255|HAMAP-Rule:MF_01694};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003758076 rbh
bjp_ig2069_scaffold_9_curated_21
unknown

Not on your lists

comp(22426..23097)
DNA (672bp) protein (224aa)
Putative uncharacterized protein id=4469279 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
bjp_ig2069_scaffold_9_curated_22
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23128..23313)
DNA (186bp) protein (62aa)
Sec-independent protein translocase protein TatA n=1 Tax=Desulfovibrio sp. U5L RepID=I2PYF8_9DELT
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
twin arginine-targeting protein translocase, TatA/E family
bjp_ig2069_scaffold_9_curated_23
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23583..24944
DNA (1362bp) protein (454aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acetyltransferase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WH36_DESOD rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AET69544.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
bjp_ig2069_scaffold_9_curated_24
unknown

Not on your lists

comp(25353..25658)
DNA (306bp) protein (102aa)
Plasmid stabilization system id=4400982 bin=GWC2_Syntrophobacterales_56_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
plasmid stabilization system protein
bjp_ig2069_scaffold_9_curated_25
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25661..25939)
DNA (279bp) protein (93aa)
Prevent-host-death family protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CBR9_DESTA
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AFM27010.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
bjp_ig2069_scaffold_9_curated_26
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26029..27378)
DNA (1350bp) protein (450aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] rbh
Phosphoglucosamine mutase {ECO:0000255|HAMAP-Rule:MF_01554}; EC=5.4.2.10 {ECO:0000255|HAMAP-Rule:MF_01554};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Phosphoglucosamine mutase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=GLMM_SYNAS rbh
bjp_ig2069_scaffold_9_curated_27
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27781..28935
DNA (1155bp) protein (385aa)
Lipopolysaccharide biosynthesis protein, putative TDP-4-oxo-6-deoxy-D-glucose transaminase {ECO:0000313|EMBL:CCE24411.1}; EC=2.6.1.- {ECO:0000313|EMBL:CCE24411.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
Lipopolysaccharide biosynthesis protein, putative TDP-4-oxo-6-deoxy-D-glucose transaminase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SYW4_META2 rbh
rffA; lipopolysaccharide biosynthesis protein, TDP-4-oxo-6-deoxy-D-glucose transaminase; K02805 lipopolysaccharide biosynthesis protein rbh
bjp_ig2069_scaffold_9_curated_28
unknown

Not on your lists

28996..30927
DNA (1932bp) protein (644aa)
Putative uncharacterized protein id=4923740 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
bjp_ig2069_scaffold_9_curated_29
unknown

Not on your lists

31116..31868
DNA (753bp) protein (251aa)
GCN5-like N-acetyltransferase id=3701972 bin=GWC2_Methylomirabilis_70_16 species=Oceaniovalibus guishaninsula genus=Oceaniovalibus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GCN5-like N-acetyltransferase
bjp_ig2069_scaffold_9_curated_30
unknown

Not on your lists

31961..33823
DNA (1863bp) protein (621aa)
Putative uncharacterized protein id=1945464 bin=GWE2_RBX1_39_32 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
Displaying items 1-30 of 722 in total

View Taxonomy