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bjp_ig2069_scaffold_145_curated

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2069_scaffold_145_curated_1
unknown

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comp(3..122)
DNA (120bp) protein (40aa)

This feature has no annotations

bjp_ig2069_scaffold_145_curated_2
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(230..1420)
DNA (1191bp) protein (397aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12); K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] rbh
Bifunctional enzyme IspD/IspF n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTI4_9FIRM rbh
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
bjp_ig2069_scaffold_145_curated_3
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1573..2583)
DNA (1011bp) protein (337aa)
Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUT8_SYNAS rbh
hypothetical protein rbh
Hypothetical membrane protein {ECO:0000313|EMBL:ABC77844.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_145_curated_4
unknown

Not on your lists

comp(2771..3280)
DNA (510bp) protein (170aa)
CarD-like transcriptional regulator id=4247439 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
carD-like transcriptional regulator; K07736 CarD family transcriptional regulator
bjp_ig2069_scaffold_145_curated_trna_3
unknown

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comp(3467..3539)
DNA (73bp)
transferRNA
bjp_ig2069_scaffold_145_curated_trna_2
unknown

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comp(3555..3626)
DNA (72bp)
transferRNA
bjp_ig2069_scaffold_145_curated_5
unknown

Not on your lists

comp(3779..4339)
DNA (561bp) protein (187aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=3900886 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
bjp_ig2069_scaffold_145_curated_6
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4391..5038)
DNA (648bp) protein (216aa)
putative transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2]
Probable transaldolase {ECO:0000255|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000255|HAMAP-Rule:MF_00494};; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
transaldolase n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B317D8 rbh
bjp_ig2069_scaffold_145_curated_7
unknown

Not on your lists

comp(5047..5313)
DNA (267bp) protein (89aa)
Hypothetical membrane protein id=4295650 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
bjp_ig2069_scaffold_145_curated_8
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5335..5820)
DNA (486bp) protein (162aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ESP62540.1}; EC=2.7.6.3 {ECO:0000313|EMBL:ESP62540.1};; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Smithella sp. ME-1 RepID=V4F816_9DELT
bjp_ig2069_scaffold_145_curated_9
unknown

Not on your lists

comp(5844..6656)
DNA (813bp) protein (271aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] rbh
Dihydrodipicolinate reductase id=4295652 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_145_curated_10
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6691..7566)
DNA (876bp) protein (292aa)
dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Syntrophus aciditrophicus (strain SB) RepID=DAPA_SYNAS rbh
bjp_ig2069_scaffold_145_curated_11
unknown

Not on your lists

comp(7597..7998)
DNA (402bp) protein (134aa)

This feature has no annotations

bjp_ig2069_scaffold_145_curated_12
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8018..9406)
DNA (1389bp) protein (463aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] rbh
Argininosuccinate lyase {ECO:0000255|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000255|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000255|HAMAP-Rule:MF_00006}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Argininosuccinate lyase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=ARLY_SYNAS rbh
bjp_ig2069_scaffold_145_curated_13
unknown

Not on your lists

comp(9424..10638)
DNA (1215bp) protein (405aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] rbh
Argininosuccinate synthase id=4295657 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_145_curated_14
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10651..11559)
DNA (909bp) protein (303aa)
ornithine carbamoyltransferase (EC:2.1.3.3); K00611 ornithine carbamoyltransferase [EC:2.1.3.3] rbh
Ornithine carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000255|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000255|HAMAP-Rule:MF_01109};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Ornithine carbamoyltransferase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=OTC_SYNAS rbh
bjp_ig2069_scaffold_145_curated_15
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11556..12746)
DNA (1191bp) protein (397aa)
acetylornithine aminotransferase (EC:2.6.1.11); K00818 acetylornithine aminotransferase [EC:2.6.1.11] rbh
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Acetylornithine aminotransferase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LT99_SYNAS rbh
bjp_ig2069_scaffold_145_curated_16
unknown

Not on your lists

comp(12885..13775)
DNA (891bp) protein (297aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] rbh
Acetylglutamate kinase id=3900981 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
bjp_ig2069_scaffold_145_curated_17
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13788..15182)
DNA (1395bp) protein (465aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LT90_SYNAS rbh
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU rbh
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_145_curated_18
unknown

Not on your lists

comp(15186..15770)
DNA (585bp) protein (195aa)
ATP-dependent protease peptidase subunit (EC:3.4.25.1); K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
ATP-dependent protease subunit HslV id=4481326 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_145_curated_19
unknown

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comp(15962..16876)
DNA (915bp) protein (305aa)
Tyrosine recombinase XerC id=4481328 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
integrase/recombinase; K03733 integrase/recombinase XerC rbh
bjp_ig2069_scaffold_145_curated_20
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16882..17382)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4F8B9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESP62645.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
cytoplasmic protein; K08999 hypothetical protein
bjp_ig2069_scaffold_145_curated_21
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17394..18719)
DNA (1326bp) protein (442aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Smithella sp. ME-1 RepID=V4FHG4_9DELT rbh
tRNA 2-methylthioadenosine synthase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA rbh
bjp_ig2069_scaffold_145_curated_22
unknown

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18997..19578
DNA (582bp) protein (194aa)

This feature has no annotations

bjp_ig2069_scaffold_145_curated_23
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19651..20496)
DNA (846bp) protein (282aa)
dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000255|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00607}; TaxID=56780 species="Bacteria; Proteobacteria;
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RSMA_SYNAS
bjp_ig2069_scaffold_145_curated_24
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20532..21527)
DNA (996bp) protein (332aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltapr
o-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] rbh
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Smithella sp. ME-1 RepID=V4FHN4_9DELT rbh
bjp_ig2069_scaffold_145_curated_25
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21638..23227
DNA (1590bp) protein (530aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; K00278 L-aspartate oxidase [EC:1.4.3.16] rbh
L-aspartate oxidase n=1 Tax=Smithella sp. ME-1 RepID=V4F8I5_9DELT rbh
bjp_ig2069_scaffold_145_curated_26
unknown

Not on your lists

comp(23263..24564)
DNA (1302bp) protein (434aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Adenylosuccinate lyase id=3714491 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_145_curated_27
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24761..25414
DNA (654bp) protein (218aa)
UPI0001693F27 related cluster n=1 Tax=unknown RepID=UPI0001693F27
Channel protein, hemolysin III family {ECO:0000313|EMBL:AHD05377.1}; TaxID=697284 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DSM 25430.;"
hemolysin III family channel protein; K11068 hemolysin III
bjp_ig2069_scaffold_145_curated_28
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25566..27272
DNA (1707bp) protein (569aa)
Integrin-like repeat protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LSP5_SYNAS rbh
integrin-like repeat-containing protein rbh
Integrin-like repeat protein {ECO:0000313|EMBL:ABC77106.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Displaying items 1-30 of 105 in total

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