ggKbase home page

bjp_ig2103_scaffold_2143

Search features with annotation key words

Displaying 30 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_2143_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..1109)
DNA (1107bp) protein (369aa)
Single-stranded DNA-specific exonuclease (RecJ) n=1 Tax=uncultured organism RepID=M1PVQ0_9ZZZZ rbh
phosphoesterase RecJ domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(1116..1577)
DNA (462bp) protein (154aa)
30S ribosomal protein S15 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=RS15_METAC
rps15p; 30S ribosomal protein S15
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1687..2658)
DNA (972bp) protein (324aa)
Methyltransferase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PW27_METMA rbh
tRNA (Guanine37-N1) -methyltransferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2678..2803)
DNA (126bp) protein (42aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2880..3668
DNA (789bp) protein (263aa)
Diphthine synthase (EC:2.1.1.98)
Diphthine synthase n=2 Tax=Methanosarcina mazei RepID=DPHB_METMA rbh
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3688..4560)
DNA (873bp) protein (291aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG55_9EURY rbh
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4596..4742
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNR8_METZD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4744..5007
DNA (264bp) protein (88aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5139..5525
DNA (387bp) protein (129aa)
Phosphoribosylaminoimidazole carboxylase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MIE0_9EURY
Phosphoribosylaminoimidazole carboxylase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5512..6567)
DNA (1056bp) protein (352aa)
Restriction endonuclease n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MBD9_9EURY
restriction endonuclease
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6692..7729)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E866_METEZ rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7775..8308
DNA (534bp) protein (178aa)
Molybdenum cofactor biosynthesis protein MoaB n=2 Tax=Methanosarcina mazei RepID=M1QIV5_METMZ
molybdenum cofactor biosynthesis protein B
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8368..8991)
DNA (624bp) protein (208aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9245..10384)
DNA (1140bp) protein (380aa)
Glutamate 5-kinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MBE1_9EURY rbh
glutamate 5-kinase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10384..11742)
DNA (1359bp) protein (453aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
UPI0003D1B68B related cluster n=1 Tax=unknown RepID=UPI0003D1B68B rbh
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11890..12162
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M8V4_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12131..12358
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MAX1_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_18
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12528..12761)
DNA (234bp) protein (78aa)
Helix-turn-helix-containing transcriptional regulator, XRE family n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VB5_METBU
XRE family transcriptional regulator {ECO:0000313|EMBL:KGK98483.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Meth
XRE family transcriptional regulator
bjp_ig2103_scaffold_2143_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12724..13128)
DNA (405bp) protein (135aa)
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_20
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13125..13496)
DNA (372bp) protein (124aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_21
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13493..13891)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VB4_METBU
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_22
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13921..14358)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WP4_METBU
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14477..15466)
DNA (990bp) protein (330aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZN3_9EURY
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_24
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15482..16069)
DNA (588bp) protein (196aa)
Holliday junction DNA helicase RuvA n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LKI0_METBM
ruvA; holliday junction DNA helicase RuvA
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_25
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16074..16544)
DNA (471bp) protein (157aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Holliday junction endonuclease RuvC n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZN5_9EURY
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16706..17527)
DNA (822bp) protein (274aa)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMA6_METZD rbh
ATP-NAD/AcoX kinase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17585..19273)
DNA (1689bp) protein (563aa)
PF03235 family protein id=5045681 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19315..20091)
DNA (777bp) protein (259aa)
bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase (EC:3.1.3.25)
Inositol-1-monophosphatase n=2 Tax=Methanosarcina mazei RepID=M1PC56_METMZ
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_29
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20094..21137)
DNA (1044bp) protein (348aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I557_METCZ rbh
elongation factor Tu domain 2 protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2143_30
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21268..21714
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SKM2_9CYAN
membrane protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 30 items

View Taxonomy