ggKbase home page

bjp_ig2103_scaffold_2591

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_2591_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..1385)
DNA (1383bp) protein (461aa)
UPI0003D1ADD7 related cluster n=1 Tax=unknown RepID=UPI0003D1ADD7 rbh
amidophosphoribosyltransferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1588..1803)
DNA (216bp) protein (72aa)
Putative snRNP Sm-like protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY05_METHD
small nuclear ribonucleoprotein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


1891..2364
DNA (474bp) protein (158aa)
PUA domain containing protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EA69_METEZ
PUA domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2422..2790
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZC8_METBU
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2787..3368
DNA (582bp) protein (194aa)
ZPR1-related zinc finger protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1A1_METHD
Zn finger containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3451..4758
DNA (1308bp) protein (436aa)
16S rRNA m(5)C 967 methyltransferase id=3904934 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
sun protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4569..6398)
DNA (1830bp) protein (610aa)
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVL4_ACEAZ
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6868..7578)
DNA (711bp) protein (237aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CRT5_9EURY
ABC-type tungstate transport system, periplasmic component {ECO:0000313|EMBL:KCZ73099.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenac
ABC-type transport system, permease component
bjp_ig2103_scaffold_2591_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7606..10812)
DNA (3207bp) protein (1069aa)
HsdR family type I site-specific deoxyribonuclease; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Type I site-specific deoxyribonuclease, R subunit n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C3G4_CYCSP rbh
hsdR1; Type I site-specific deoxyribonuclease, R subunit
bjp_ig2103_scaffold_2591_10
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10809..11927)
DNA (1119bp) protein (373aa)
Type I restriction enzyme, S subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IU4_THICR rbh
restriction modification system DNA specificity subunit
Type I restriction enzyme, S subunit {ECO:0000313|EMBL:ABB40929.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="T
bjp_ig2103_scaffold_2591_11
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12032..13180)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Bacillus acidiproducens RepID=UPI000372A2FA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAC41935.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" sou
bjp_ig2103_scaffold_2591_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13177..13692)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZR47_CLOB0
Uncharacterized protein {ECO:0000313|EMBL:KJZ94201.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
bjp_ig2103_scaffold_2591_13
unknown

Not on your lists

comp(13747..14004)
DNA (258bp) protein (86aa)

This feature has no annotations

bjp_ig2103_scaffold_2591_14

Not on your lists

comp(14004..15083)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZK90_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD55900.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig2103_scaffold_2591_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15083..15265)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. (strain SM9913) RepID=E6RKA8_PSEU9
Uncharacterized protein {ECO:0000313|EMBL:KCZ72005.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
hypothetical protein
bjp_ig2103_scaffold_2591_16
unknown

Not on your lists

comp(15262..15645)
DNA (384bp) protein (128aa)

This feature has no annotations

bjp_ig2103_scaffold_2591_17

Not on your lists

comp(15642..17726)
DNA (2085bp) protein (695aa)
Type I restriction-modification system DNA methylase n=1 Tax=uncultured archaeon GZfos11A10 RepID=Q64EM6_9ARCH rbh
Type I restriction-modification system DNA methylase {ECO:0000313|EMBL:AAU82151.1}; TaxID=285399 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos11A10.;"
DNA methyltransferase
bjp_ig2103_scaffold_2591_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17822..18136)
DNA (315bp) protein (105aa)
Tungstate ABC transporter permease n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L3D3_9BACI
extracellular solute-binding protein; K05772 tungstate transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_41_19_curated
ABC-type tungstate transport system permease-like protein
bjp_ig2103_scaffold_2591_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18129..18641)
DNA (513bp) protein (171aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4X7_DESAP
extracellular solute-binding protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_20
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18671..19663)
DNA (993bp) protein (331aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=PUR5_METBU rbh
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_21
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19874..20677)
DNA (804bp) protein (268aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBK2_METEZ rbh
xylose isomerase domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_22
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21052..22065)
DNA (1014bp) protein (338aa)
Exopolyphosphatase-related protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1PB86_9EURY
TrkA-N domain protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22104..23150)
DNA (1047bp) protein (349aa)
DNA primase large subunit PriL n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MGW5_9EURY rbh
DNA primase large subunit
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_24
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23153..23890)
DNA (738bp) protein (246aa)
DNA polymerase sliding clamp n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVK8_METHD rbh
proliferating cell nuclear antigen PCNA
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_2591_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24881..25579
DNA (699bp) protein (233aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1392998 species="Archaea; Eu
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E742_METMS
Displaying 25 items

View Taxonomy