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bjp_ig2103_scaffold_11082

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_11082_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..773)
DNA (771bp) protein (257aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PYM5_METMA
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
Phytoene dehydrogenase
bjp_ig2103_scaffold_11082_2
unknown

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889..2082
DNA (1194bp) protein (398aa)

This feature has no annotations

bjp_ig2103_scaffold_11082_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(2160..2357)
DNA (198bp) protein (66aa)
3-dehydroquinate synthase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNP0_METZD
3-dehydroquinate synthase Tax=RBG_16_Euryarchaeota_41_19_curated
3-dehydroquinate synthase
bjp_ig2103_scaffold_11082_trna_1
unknown

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comp(2552..2635)
DNA (84bp)
transferRNA
bjp_ig2103_scaffold_11082_4
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2898..4025
DNA (1128bp) protein (376aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PXH3_METMA
hypothetical protein
Radical SAM protein with DUF512 domain {ECO:0000313|EMBL:ABE53273.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="
bjp_ig2103_scaffold_11082_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4056..4403
DNA (348bp) protein (116aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_11082_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4430..4885)
DNA (456bp) protein (152aa)
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKF0_METZD
alkylhydroperoxidase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_11082_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4958..5722)
DNA (765bp) protein (255aa)
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPT7_METZD rbh
ribosomal RNA methyltransferase RrmJ/FtsJ
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_11082_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5737..6027)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Methanosarcina barkeri RepID=Q46C60_METBF
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_11082_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6122..6553)
DNA (432bp) protein (144aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_11082_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6531..7145)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MLV6_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_11082_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7168..7536)
DNA (369bp) protein (123aa)
Response regulator receiver n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEM9_9EURY
response regulator receiver
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
bjp_ig2103_scaffold_11082_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7541..8878)
DNA (1338bp) protein (446aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
HATPase domain-containing multisensor signal transduction histidine kinase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12X67_METBU
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 13 items

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