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BJP_Ig2103_Hor_218_2014_Dechloromonas_rel_57_6_partial

BJP_IG2103_Dechloromonas_57_6
In projects: BJP_IG2103  |  horonobe_genomes

Consensus taxonomy: Dechloromonas  →  Rhodocyclales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Annoying sediment metagenome obscuring results

Displaying items 101-150 of 467 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2103_scaffold_10307
Genus: Dechloromonas (80%)
5 3339 bp 59.15 5.48 86.25
bjp_ig2103_scaffold_3941
Species: Dechloromonas aromatica (80%)
5 7508 bp 58.83 5.31 99.21
bjp_ig2103_scaffold_5461
Genus: Dechloromonas (80%)
5 5672 bp 56.84 5.26 92.72
bjp_ig2103_scaffold_8421
Species: BJP_IG2103_Dechloromonas_63_51 (60%)
5 3944 bp 55.96 6.58 81.62
bjp_ig2103_scaffold_7791
Species: uncultured bacterium (60%)
5 4213 bp 51.13 5.70 100.26
bjp_ig2103_scaffold_9098
Species: Dechloromonas aromatica (80%)
5 3700 bp 56.65 5.72 92.68
bjp_ig2103_scaffold_7558
Genus: Dechloromonas (80%)
5 4327 bp 54.03 6.62 93.60
bjp_ig2103_scaffold_6492
Species: BJP_08E140C01_Dechloromonas_61_78 (60%)
5 4913 bp 55.55 5.28 88.78
bjp_ig2103_scaffold_13162
Species: uncultured bacterium (80%)
5 2712 bp 51.99 4.92 95.91
bjp_ig2103_scaffold_9645
Genus: Dechloromonas (60%)
5 3527 bp 58.58 6.38 87.78
bjp_ig2103_scaffold_9647
Genus: Dechloromonas (80%)
5 3527 bp 58.66 6.63 95.95
bjp_ig2103_scaffold_8977
Species: uncultured bacterium (80%)
5 3742 bp 53.87 5.29 95.00
bjp_ig2103_scaffold_11989
Genus: Dechloromonas (80%)
5 2934 bp 57.67 5.11 91.34
bjp_ig2103_scaffold_16879
Species: uncultured bacterium (80%)
5 2184 bp 54.12 6.25 85.30
bjp_ig2103_scaffold_12211
Genus: Dechloromonas (80%)
5 2894 bp 50.35 4.82 92.05
bjp_ig2103_scaffold_7597
Genus: Dechloromonas (100%)
5 4303 bp 59.82 5.75 85.96
bjp_ig2103_scaffold_12474
Genus: Dechloromonas (60%)
5 2849 bp 55.18 6.79 85.71
bjp_ig2103_scaffold_4996
Species: BJP_IG2103_Dechloromonas_60_92 (60%)
5 6121 bp 60.46 6.57 94.84
bjp_ig2103_scaffold_14822
Species: uncultured bacterium (60%)
5 2442 bp 55.69 5.16 86.12
bjp_ig2103_scaffold_9430
Species: uncultured bacterium (60%)
5 3585 bp 55.98 6.28 87.73
bjp_ig2103_scaffold_6806
Species: Dechloromonas aromatica (60%)
5 4729 bp 56.93 5.20 98.84
bjp_ig2103_scaffold_9700
Genus: Dechloromonas (100%)
5 3510 bp 58.95 6.62 93.25
bjp_ig2103_scaffold_9701
Genus: Dechloromonas (100%)
5 3509 bp 54.23 5.30 97.38
bjp_ig2103_scaffold_5566
Genus: Dechloromonas (60%)
5 5594 bp 54.95 6.76 86.66
bjp_ig2103_scaffold_12503
Domain: Bacteria (60%)
5 2843 bp 58.53 5.22 79.28
bjp_ig2103_scaffold_7376
Species: BJP_IG2158_Methylococcales_50_91 (100%)
5 4411 bp 50.80 4.66 92.43
bjp_ig2103_scaffold_10676
Genus: Dechloromonas (100%)
5 3244 bp 58.54 6.66 91.65
bjp_ig2103_scaffold_11544
Genus: Dechloromonas (100%)
5 3028 bp 57.86 5.85 100.07
bjp_ig2103_scaffold_9478
Species: uncultured bacterium (100%)
5 3569 bp 47.41 5.80 98.43
bjp_ig2103_scaffold_6597
Genus: Dechloromonas (80%)
5 4850 bp 57.07 5.78 83.20
bjp_ig2103_scaffold_10206
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
4 3363 bp 60.57 6.82 100.18
bjp_ig2103_scaffold_23029
Species: Dechloromonas aromatica (50%)
4 1671 bp 55.77 5.30 92.28
bjp_ig2103_scaffold_18010
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
4 2066 bp 60.70 4.36 87.42
bjp_ig2103_scaffold_20780
Genus: Dechloromonas (100%)
4 1829 bp 58.45 5.08 99.73
bjp_ig2103_scaffold_8330
Species: uncultured bacterium (75%)
4 3986 bp 54.47 5.64 99.12
bjp_ig2103_scaffold_15099
Species: uncultured bacterium (75%)
4 2402 bp 53.00 4.43 92.55
bjp_ig2103_scaffold_11595
Species: uncultured bacterium (75%)
4 3019 bp 56.05 4.32 96.99
bjp_ig2103_scaffold_9261
Species: Dechloromonas aromatica (50%)
4 3643 bp 58.55 5.60 85.07
bjp_ig2103_scaffold_8845
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
4 3789 bp 60.81 4.79 98.42
bjp_ig2103_scaffold_10742
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
4 3228 bp 57.71 5.48 89.03
bjp_ig2103_scaffold_6123
Genus: Dechloromonas (50%)
4 5156 bp 59.41 6.23 89.49
bjp_ig2103_scaffold_15619
Species: uncultured bacterium (100%)
4 2336 bp 56.29 5.39 99.02
bjp_ig2103_scaffold_8598
Species: uncultured bacterium (75%)
4 3877 bp 52.39 5.61 72.30
bjp_ig2103_scaffold_11607
Species: uncultured bacterium (75%)
4 3017 bp 56.12 6.71 101.43
bjp_ig2103_scaffold_17466
Species: Dechloromonas aromatica (50%)
4 2124 bp 52.40 5.86 87.01
bjp_ig2103_scaffold_8348
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
4 3977 bp 52.23 6.34 80.41
bjp_ig2103_scaffold_15885
Species: uncultured bacterium (75%)
4 2303 bp 47.76 3.78 90.79
bjp_ig2103_scaffold_12845
Species: Dechloromonas aromatica (50%)
4 2778 bp 57.81 5.08 75.59
bjp_ig2103_scaffold_10504
Species: uncultured bacterium (75%)
4 3291 bp 52.66 5.79 92.71
bjp_ig2103_scaffold_16755
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
4 2201 bp 55.47 4.84 95.82
Displaying items 101-150 of 467 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.