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BJP_Ig2103_Hor_218_2014_Dechloromonas_rel_57_6_partial

BJP_IG2103_Dechloromonas_57_6
In projects: BJP_IG2103  |  horonobe_genomes

Consensus taxonomy: Dechloromonas  →  Rhodocyclales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Annoying sediment metagenome obscuring results

Displaying items 201-250 of 467 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2103_scaffold_19856
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
4 1898 bp 53.90 3.87 83.77
bjp_ig2103_scaffold_13946
Genus: Dechloromonas (75%)
4 2578 bp 54.23 5.53 98.33
bjp_ig2103_scaffold_14797
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
4 2447 bp 59.54 6.68 88.64
bjp_ig2103_scaffold_12974
Species: Dechloromonas aromatica (50%)
4 2750 bp 58.80 5.73 100.36
bjp_ig2103_scaffold_10125
Genus: Dechloromonas (50%)
4 3387 bp 53.73 6.02 82.82
bjp_ig2103_scaffold_5535
Species: Dechloromonas aromatica (50%)
4 5610 bp 57.61 6.34 92.57
bjp_ig2103_scaffold_5793
Species: uncultured bacterium (75%)
4 5421 bp 54.14 5.51 96.02
bjp_ig2103_scaffold_15770
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
4 2316 bp 56.74 4.99 94.30
bjp_ig2103_scaffold_11243
Species: BJP_IG2103_Dechloromonas_60_92 (75%)
4 3861 bp 56.18 5.44 94.09
bjp_ig2103_scaffold_16387
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
4 2242 bp 61.15 6.82 99.96
bjp_ig2103_scaffold_18955
Species: uncultured bacterium (100%)
4 1975 bp 52.10 5.24 94.03
bjp_ig2103_scaffold_13464
Species: BJP_IG2103_Dechloromonas_63_51 (75%)
4 2662 bp 58.08 4.40 92.98
bjp_ig2103_scaffold_8250
Species: BJP_IG2069_Desfulfarculales_53_13 (100%)
4 4020 bp 54.63 4.96 83.43
bjp_ig2103_scaffold_17628
Species: uncultured bacterium (50%)
4 2104 bp 47.58 3.14 98.53
bjp_ig2103_scaffold_12237
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
4 2889 bp 56.70 4.78 98.96
bjp_ig2103_scaffold_10916
Species: uncultured bacterium (50%)
4 3184 bp 54.74 5.65 97.52
bjp_ig2103_scaffold_9950
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
4 3436 bp 55.53 4.80 83.38
bjp_ig2103_scaffold_14579
Genus: Dechloromonas (50%)
4 2483 bp 53.32 5.07 84.82
bjp_ig2103_scaffold_15287
Species: uncultured bacterium (75%)
4 2379 bp 54.14 5.55 79.70
bjp_ig2103_scaffold_13998
Species: Dechloromonas aromatica (50%)
4 2572 bp 55.17 4.96 98.79
bjp_ig2103_scaffold_16673
Species: uncultured bacterium (75%)
4 2210 bp 52.94 6.38 89.05
bjp_ig2103_scaffold_14341
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
4 2520 bp 61.90 5.77 73.81
bjp_ig2103_scaffold_7902
Species: Dechloromonas aromatica (50%)
4 4162 bp 60.72 5.48 95.07
bjp_ig2103_scaffold_20993
Class: Betaproteobacteria (50%)
4 1813 bp 49.64 4.72 78.93
bjp_ig2103_scaffold_9209
Genus: Dechloromonas (50%)
4 3664 bp 56.17 5.57 86.71
bjp_ig2103_scaffold_6838
Species: uncultured bacterium (50%)
4 4707 bp 53.45 5.64 94.01
bjp_ig2103_scaffold_18230
Species: Sulfuricella sp. T08 (50%)
4 2044 bp 60.62 5.87 82.93
bjp_ig2103_scaffold_12527
Species: Dechloromonas aromatica (50%)
4 2838 bp 61.91 6.08 99.89
bjp_ig2103_scaffold_4537
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
4 6668 bp 58.26 5.67 90.12
bjp_ig2103_scaffold_11299
Species: uncultured bacterium (50%)
4 3087 bp 55.88 6.71 88.63
bjp_ig2103_scaffold_17413
Genus: Dechloromonas (75%)
4 2128 bp 59.82 4.30 96.71
bjp_ig2103_scaffold_12536
Species: Dechloromonas aromatica (50%)
4 2836 bp 57.79 6.66 96.16
bjp_ig2103_scaffold_14365
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
4 2516 bp 60.69 5.07 97.89
bjp_ig2103_scaffold_4806
Species: uncultured bacterium (50%)
4 6326 bp 53.60 9.06 95.80
bjp_ig2103_scaffold_10199
Genus: Dechloromonas (50%)
4 3365 bp 56.46 4.95 93.97
bjp_ig2103_scaffold_10457
Species: uncultured bacterium (50%)
4 3302 bp 56.45 5.41 97.94
bjp_ig2103_scaffold_10202
Species: uncultured bacterium (50%)
4 3364 bp 55.74 6.87 92.93
bjp_ig2103_scaffold_19953
Species: uncultured bacterium (100%)
3 1891 bp 49.44 4.12 95.19
bjp_ig2103_scaffold_19955
Genus: Dechloromonas (66.67%)
3 1891 bp 56.11 5.39 80.75
bjp_ig2103_scaffold_13277
Genus: Dechloromonas (100%)
3 2692 bp 59.58 5.85 99.18
bjp_ig2103_scaffold_16207
Genus: Dechloromonas (66.67%)
3 2265 bp 55.58 4.50 95.50
bjp_ig2103_scaffold_18007
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 2066 bp 53.44 4.36 87.27
bjp_ig2103_scaffold_12049
Species: uncultured bacterium (66.67%)
3 2922 bp 54.69 6.16 76.28
bjp_ig2103_scaffold_13802
Genus: Dechloromonas (100%)
3 2603 bp 57.40 7.03 84.94
bjp_ig2103_scaffold_8844
Species: Dechloromonas aromatica (66.67%)
3 3789 bp 59.28 5.19 99.52
bjp_ig2103_scaffold_11340
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 3078 bp 58.32 9.21 100.29
bjp_ig2103_scaffold_17197
Genus: Dechloromonas (66.67%)
3 2148 bp 53.03 4.89 99.86
bjp_ig2103_scaffold_18789
Species: uncultured bacterium (66.67%)
3 1991 bp 56.40 6.78 88.15
bjp_ig2103_scaffold_16991
Genus: Dechloromonas (66.67%)
3 2173 bp 56.70 4.49 95.12
bjp_ig2103_scaffold_11859
Species: Dechloromonas aromatica (66.67%)
3 2959 bp 56.78 6.64 99.36
Displaying items 201-250 of 467 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.