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BJP_Ig2103_Hor_218_2014_Dechloromonas_rel_57_6_partial

BJP_IG2103_Dechloromonas_57_6
In projects: BJP_IG2103  |  horonobe_genomes

Consensus taxonomy: Dechloromonas  →  Rhodocyclales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Annoying sediment metagenome obscuring results

Displaying items 251-300 of 467 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2103_scaffold_10238
Genus: Dechloromonas (100%)
3 3354 bp 56.98 4.87 96.60
bjp_ig2103_scaffold_11864
Species: Dechloromonas aromatica (66.67%)
3 2958 bp 57.88 5.32 97.57
bjp_ig2103_scaffold_15883
Genus: Dechloromonas (100%)
3 2303 bp 57.06 5.93 86.63
bjp_ig2103_scaffold_17726
Species: BJP_IG2103_Dechloromonas_60_92 (66.67%)
3 2094 bp 54.78 5.09 97.42
bjp_ig2103_scaffold_16238
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 2262 bp 56.45 7.16 85.15
bjp_ig2103_scaffold_9279
Class: Betaproteobacteria (66.67%)
3 3636 bp 59.27 5.24 93.48
bjp_ig2103_scaffold_20553
Species: BJP_IG2103_Dechloromonas_60_92 (66.67%)
3 1847 bp 61.88 4.55 97.29
bjp_ig2103_scaffold_20810
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 1827 bp 59.33 5.01 99.84
bjp_ig2103_scaffold_8610
Genus: Dechloromonas (100%)
3 3873 bp 56.83 5.58 89.78
bjp_ig2103_scaffold_13063
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 2733 bp 59.86 4.34 79.25
bjp_ig2103_scaffold_15386
Species: RHI_Rhodobacterales_62_75 (66.67%)
3 2365 bp 60.63 5.58 92.85
bjp_ig2103_scaffold_8376
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 3964 bp 57.54 4.58 99.37
bjp_ig2103_scaffold_13593
Species: uncultured bacterium (66.67%)
3 2637 bp 56.66 5.06 95.45
bjp_ig2103_scaffold_12874
Genus: Dechloromonas (66.67%)
3 2772 bp 57.14 5.95 95.13
bjp_ig2103_scaffold_17755
Genus: Dechloromonas (100%)
3 2091 bp 56.91 5.67 87.09
bjp_ig2103_scaffold_16268
Species: Dechloromonas aromatica (66.67%)
3 2258 bp 61.56 5.65 101.11
bjp_ig2103_scaffold_15662
Species: BJP_08E140C01_Dechloromonas_61_78 (66.67%)
3 2331 bp 58.30 4.95 100.13
bjp_ig2103_scaffold_20582
Species: BJP_IG2103_Dechloromonas_60_92 (66.67%)
3 1845 bp 57.24 5.77 98.05
bjp_ig2103_scaffold_13346
Genus: Dechloromonas (66.67%)
3 2681 bp 53.97 5.32 93.32
bjp_ig2103_scaffold_18586
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 2010 bp 57.11 4.63 93.73
bjp_ig2103_scaffold_6685
Species: uncultured bacterium (66.67%)
3 4800 bp 54.83 5.38 83.44
bjp_ig2103_scaffold_15925
Species: BJP_08E140C01_Dechloromonas_61_78 (66.67%)
3 2299 bp 58.07 5.42 100.35
bjp_ig2103_scaffold_14710
Species: Dechloromonas aromatica (66.67%)
3 2461 bp 58.88 6.10 90.94
bjp_ig2103_scaffold_18848
Species: uncultured bacterium (100%)
3 1984 bp 49.14 2.57 97.98
bjp_ig2103_scaffold_7506
Genus: Dechloromonas (100%)
3 4349 bp 61.21 4.97 93.61
bjp_ig2103_scaffold_12379
Species: Dechloromonas aromatica (66.67%)
3 2865 bp 51.83 6.44 89.21
bjp_ig2103_scaffold_12636
Species: BJP_08E140C01_Dechloromonas_61_78 (66.67%)
3 2818 bp 56.32 6.33 87.30
bjp_ig2103_scaffold_15677
Species: BJP_08E140C01_Dechloromonas_61_78 (66.67%)
3 2329 bp 59.34 5.35 88.88
bjp_ig2103_scaffold_17265
Class: Betaproteobacteria (66.67%)
3 2142 bp 58.87 4.90 94.82
bjp_ig2103_scaffold_17777
Species: uncultured bacterium (66.67%)
3 2088 bp 55.36 5.60 94.97
bjp_ig2103_scaffold_16545
Species: uncultured bacterium (66.67%)
3 2224 bp 48.65 3.57 85.52
bjp_ig2103_scaffold_14722
Genus: Dechloromonas (66.67%)
3 2459 bp 59.46 4.51 89.43
bjp_ig2103_scaffold_15939
Species: Dechloromonas aromatica (100%)
3 2297 bp 58.47 5.49 99.52
bjp_ig2103_scaffold_10049
Species: Dechloromonas aromatica (66.67%)
3 3409 bp 59.05 5.32 96.10
bjp_ig2103_scaffold_18614
Genus: Dechloromonas (66.67%)
3 2008 bp 55.83 6.27 71.56
bjp_ig2103_scaffold_20107
Species: BJP_IG2103_Dechloromonas_60_92 (66.67%)
3 1879 bp 55.83 5.99 80.47
bjp_ig2103_scaffold_13636
Species: BJP_08E140C01_Dechloromonas_61_78 (66.67%)
3 2632 bp 55.85 5.30 96.54
bjp_ig2103_scaffold_5981
Species: BJP_08E140C01_Dechloromonas_61_78 (100%)
3 5275 bp 58.71 5.83 94.29
bjp_ig2103_scaffold_17541
Species: Thauera sp. SWB20 (66.67%)
3 2116 bp 58.22 4.40 84.36
bjp_ig2103_scaffold_12149
Species: uncultured bacterium (66.67%)
3 2903 bp 56.18 5.84 92.49
bjp_ig2103_scaffold_14231
Species: Dechloromonas aromatica (66.67%)
3 2538 bp 57.72 5.38 94.21
bjp_ig2103_scaffold_12920
Genus: Dechloromonas (100%)
3 2761 bp 59.94 5.22 89.75
bjp_ig2103_scaffold_16057
Species: BJP_08E140C01_Anaerolineales_40_8 (100%)
3 2282 bp 47.98 6.51 92.42
bjp_ig2103_scaffold_10321
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 3335 bp 56.16 5.35 85.37
bjp_ig2103_scaffold_19043
Species: Dechloromonas aromatica (66.67%)
3 1967 bp 56.28 4.27 99.44
bjp_ig2103_scaffold_17806
Genus: Dechloromonas (100%)
3 2085 bp 60.43 4.82 98.27
bjp_ig2103_scaffold_17301
Genus: Dechloromonas (100%)
3 2138 bp 54.49 4.70 94.86
bjp_ig2103_scaffold_16584
Genus: Dechloromonas (100%)
3 2219 bp 57.01 5.48 100.32
bjp_ig2103_scaffold_16331
Species: BJP_IG2103_Dechloromonas_60_92 (66.67%)
3 2248 bp 57.65 4.94 100.22
bjp_ig2103_scaffold_7816
Genus: Dechloromonas (100%)
3 4202 bp 58.97 5.03 99.67
Displaying items 251-300 of 467 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.