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BJP_Ig2103_Hor_218_2014_Dechloromonas_rel_57_6_partial

BJP_IG2103_Dechloromonas_57_6
In projects: BJP_IG2103  |  horonobe_genomes

Consensus taxonomy: Dechloromonas  →  Rhodocyclales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Annoying sediment metagenome obscuring results

Displaying items 351-400 of 467 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2103_scaffold_15239
Species: Azoarcus sp. KH32C (50%)
4 2384 bp 56.54 5.54 87.84
bjp_ig2103_scaffold_9645
Genus: Dechloromonas (60%)
5 3527 bp 58.58 6.38 87.78
bjp_ig2103_scaffold_9430
Species: uncultured bacterium (60%)
5 3585 bp 55.98 6.28 87.73
bjp_ig2103_scaffold_20191
Genus: Dechloromonas (100%)
3 1873 bp 60.06 5.05 87.61
bjp_ig2103_scaffold_4274
Species: uncultured bacterium (50%)
8 7030 bp 50.17 6.49 87.52
bjp_ig2103_scaffold_19760
Species: uncultured bacterium (100%)
1 1907 bp 57.94 6.37 87.47
bjp_ig2103_scaffold_7695
Genus: Dechloromonas (80%)
5 4255 bp 55.63 6.49 87.43
bjp_ig2103_scaffold_18010
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
4 2066 bp 60.70 4.36 87.42
bjp_ig2103_scaffold_12636
Species: BJP_08E140C01_Dechloromonas_61_78 (66.67%)
3 2818 bp 56.32 6.33 87.30
bjp_ig2103_scaffold_18007
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 2066 bp 53.44 4.36 87.27
bjp_ig2103_scaffold_14544
Species: Dechloromonas aromatica (50%)
2 2489 bp 57.21 9.40 87.26
bjp_ig2103_scaffold_18270
Species: BJP_IG2103_Rhodocyclales_63_50 (50%)
2 2040 bp 63.14 6.10 87.21
bjp_ig2103_scaffold_17755
Genus: Dechloromonas (100%)
3 2091 bp 56.91 5.67 87.09
bjp_ig2103_scaffold_17466
Species: Dechloromonas aromatica (50%)
4 2124 bp 52.40 5.86 87.01
bjp_ig2103_scaffold_17209
Species: uncultured bacterium (100%)
2 2147 bp 55.33 5.24 86.91
bjp_ig2103_scaffold_9209
Genus: Dechloromonas (50%)
4 3664 bp 56.17 5.57 86.71
bjp_ig2103_scaffold_5566
Genus: Dechloromonas (60%)
5 5594 bp 54.95 6.76 86.66
bjp_ig2103_scaffold_15883
Genus: Dechloromonas (100%)
3 2303 bp 57.06 5.93 86.63
bjp_ig2103_scaffold_17600
Species: Dechloromonas aromatica (100%)
2 2107 bp 56.38 4.77 86.57
bjp_ig2103_scaffold_3489
Genus: Dechloromonas (66.67%)
9 8284 bp 57.89 6.05 86.52
bjp_ig2103_scaffold_9300
Species: uncultured bacterium (66.67%)
6 3628 bp 56.67 6.00 86.41
bjp_ig2103_scaffold_14993
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
4 2419 bp 51.88 5.70 86.32
bjp_ig2103_scaffold_10307
Genus: Dechloromonas (80%)
5 3339 bp 59.15 5.48 86.25
bjp_ig2103_scaffold_11644
Species: Dechloromonas aromatica (66.67%)
6 3006 bp 56.05 4.49 86.23
bjp_ig2103_scaffold_10580
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
4 3272 bp 59.20 5.78 86.19
bjp_ig2103_scaffold_14822
Species: uncultured bacterium (60%)
5 2442 bp 55.69 5.16 86.12
bjp_ig2103_scaffold_6189
Genus: Dechloromonas (50%)
6 5112 bp 58.63 4.96 86.09
bjp_ig2103_scaffold_7597
Genus: Dechloromonas (100%)
5 4303 bp 59.82 5.75 85.96
bjp_ig2103_scaffold_20886
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
2 1822 bp 57.41 5.85 85.95
bjp_ig2103_scaffold_9802
Genus: Dechloromonas (75%)
4 3480 bp 56.38 4.91 85.95
bjp_ig2103_scaffold_7560
Class: Betaproteobacteria (50%)
6 4325 bp 52.92 5.72 85.94
bjp_ig2103_scaffold_11620
Genus: Dechloromonas (75%)
4 3014 bp 55.87 5.28 85.90
bjp_ig2103_scaffold_12474
Genus: Dechloromonas (60%)
5 2849 bp 55.18 6.79 85.71
bjp_ig2103_scaffold_3406
Genus: Dechloromonas (100%)
8 8435 bp 56.80 5.39 85.68
bjp_ig2103_scaffold_9199
Genus: Dechloromonas (100%)
3 3668 bp 62.24 6.38 85.55
bjp_ig2103_scaffold_16545
Species: uncultured bacterium (66.67%)
3 2224 bp 48.65 3.57 85.52
bjp_ig2103_scaffold_17425
Species: Dechloromonas aromatica (66.67%)
3 2127 bp 58.58 5.78 85.47
bjp_ig2103_scaffold_10321
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 3335 bp 56.16 5.35 85.37
bjp_ig2103_scaffold_16879
Species: uncultured bacterium (80%)
5 2184 bp 54.12 6.25 85.30
bjp_ig2103_scaffold_10378
Species: BJP_08E140C01_Dechloromonas_61_78 (66.67%)
3 3324 bp 55.63 6.18 85.29
bjp_ig2103_scaffold_5901
Species: uncultured bacterium (50%)
6 5338 bp 55.08 5.34 85.26
bjp_ig2103_scaffold_16238
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 2262 bp 56.45 7.16 85.15
bjp_ig2103_scaffold_9261
Species: Dechloromonas aromatica (50%)
4 3643 bp 58.55 5.60 85.07
bjp_ig2103_scaffold_17714
Species: Dechloromonas aromatica (50%)
2 2095 bp 56.09 5.44 85.06
bjp_ig2103_scaffold_4197
Genus: Dechloromonas (88.89%)
9 7144 bp 54.30 6.03 84.95
bjp_ig2103_scaffold_13802
Genus: Dechloromonas (100%)
3 2603 bp 57.40 7.03 84.94
bjp_ig2103_scaffold_14579
Genus: Dechloromonas (50%)
4 2483 bp 53.32 5.07 84.82
bjp_ig2103_scaffold_17541
Species: Thauera sp. SWB20 (66.67%)
3 2116 bp 58.22 4.40 84.36
bjp_ig2103_scaffold_10792
Genus: Dechloromonas (50%)
4 3215 bp 62.67 5.41 84.26
bjp_ig2103_scaffold_12089
Species: Dechloromonas aromatica (80%)
5 2914 bp 58.20 6.43 84.18
Displaying items 351-400 of 467 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.