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BJP_Ig2103_Hor_218_2014_Dechloromonas_rel_57_6_partial

BJP_IG2103_Dechloromonas_57_6
In projects: BJP_IG2103  |  horonobe_genomes

Consensus taxonomy: Dechloromonas  →  Rhodocyclales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Annoying sediment metagenome obscuring results

Displaying items 401-450 of 467 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2103_scaffold_19170
Species: uncultured bacterium (66.67%)
3 1955 bp 60.77 4.22 84.09
bjp_ig2103_scaffold_7049
Genus: Dechloromonas (50%)
4 4571 bp 56.36 6.10 83.81
bjp_ig2103_scaffold_19856
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
4 1898 bp 53.90 3.87 83.77
bjp_ig2103_scaffold_13297
Genus: Dechloromonas (80%)
5 4396 bp 56.85 4.50 83.74
bjp_ig2103_scaffold_6685
Species: uncultured bacterium (66.67%)
3 4800 bp 54.83 5.38 83.44
bjp_ig2103_scaffold_8250
Species: BJP_IG2069_Desfulfarculales_53_13 (100%)
4 4020 bp 54.63 4.96 83.43
bjp_ig2103_scaffold_20530
Species: uncultured bacterium (100%)
5 1849 bp 52.30 5.68 83.40
bjp_ig2103_scaffold_9950
Species: BJP_08E140C01_Dechloromonas_61_78 (50%)
4 3436 bp 55.53 4.80 83.38
bjp_ig2103_scaffold_16422
Species: RHI_Rhodobacterales_62_75 (66.67%)
3 2238 bp 59.47 5.43 83.38
bjp_ig2103_scaffold_6597
Genus: Dechloromonas (80%)
5 4850 bp 57.07 5.78 83.20
bjp_ig2103_scaffold_8726
Genus: Dechloromonas (66.67%)
3 3832 bp 58.14 6.81 82.99
bjp_ig2103_scaffold_18126
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
2 2054 bp 54.24 5.84 82.96
bjp_ig2103_scaffold_18230
Species: Sulfuricella sp. T08 (50%)
4 2044 bp 60.62 5.87 82.93
bjp_ig2103_scaffold_13072
Genus: Dechloromonas (50%)
4 2731 bp 60.86 5.99 82.83
bjp_ig2103_scaffold_10125
Genus: Dechloromonas (50%)
4 3387 bp 53.73 6.02 82.82
bjp_ig2103_scaffold_9777
Species: Dechloromonas aromatica (60%)
5 3488 bp 55.05 4.73 82.60
bjp_ig2103_scaffold_15738
Species: Dechloromonas aromatica (66.67%)
3 2321 bp 54.33 6.14 82.59
bjp_ig2103_scaffold_7771
Species: Dechloromonas aromatica (50%)
4 4221 bp 55.41 5.83 82.59
bjp_ig2103_scaffold_14549
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
2 2489 bp 55.44 5.73 82.44
bjp_ig2103_scaffold_12097
Species: Dechloromonas aromatica (75%)
4 2913 bp 54.14 7.62 81.77
bjp_ig2103_scaffold_8421
Species: BJP_IG2103_Dechloromonas_63_51 (60%)
5 3944 bp 55.96 6.58 81.62
bjp_ig2103_scaffold_7935
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
6 4147 bp 56.55 3.94 81.60
bjp_ig2103_scaffold_8563
Species: uncultured bacterium (66.67%)
3 3888 bp 56.02 6.33 81.17
bjp_ig2103_scaffold_19955
Genus: Dechloromonas (66.67%)
3 1891 bp 56.11 5.39 80.75
bjp_ig2103_scaffold_20107
Species: BJP_IG2103_Dechloromonas_60_92 (66.67%)
3 1879 bp 55.83 5.99 80.47
bjp_ig2103_scaffold_8348
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
4 3977 bp 52.23 6.34 80.41
bjp_ig2103_scaffold_15750 3 2319 bp 58.56 4.85 80.03
bjp_ig2103_scaffold_15287
Species: uncultured bacterium (75%)
4 2379 bp 54.14 5.55 79.70
bjp_ig2103_scaffold_18264
Species: Dechloromonas aromatica (100%)
1 2041 bp 59.19 6.03 79.52
bjp_ig2103_scaffold_7003
Genus: Dechloromonas (66.67%)
6 4600 bp 53.85 6.33 79.50
bjp_ig2103_scaffold_14599
Species: Dechloromonas aromatica (50%)
2 2479 bp 51.92 4.90 79.39
bjp_ig2103_scaffold_14015
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
4 2569 bp 50.84 4.96 79.29
bjp_ig2103_scaffold_12503
Domain: Bacteria (60%)
5 2843 bp 58.53 5.22 79.28
bjp_ig2103_scaffold_13063
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
3 2733 bp 59.86 4.34 79.25
bjp_ig2103_scaffold_20993
Class: Betaproteobacteria (50%)
4 1813 bp 49.64 4.72 78.93
bjp_ig2103_scaffold_9078
Genus: Dechloromonas (80%)
5 3709 bp 58.05 4.69 78.86
bjp_ig2103_scaffold_16641
Species: BJP_IG2069_Bacteroidetes_43_11 (100%)
2 2213 bp 48.31 4.27 78.76
bjp_ig2103_scaffold_17323
Species: BJP_IG2102_Elusimicrobia_52_42 (100%)
2 2137 bp 50.77 3.58 78.61
bjp_ig2103_scaffold_13721
Species: Dechloromonas aromatica (100%)
1 2617 bp 56.97 5.27 78.41
bjp_ig2103_scaffold_14644
Genus: Dechloromonas (50%)
6 2471 bp 54.67 6.62 78.35
bjp_ig2103_scaffold_10989
Species: uncultured bacterium (60%)
5 3167 bp 48.82 5.68 78.34
bjp_ig2103_scaffold_19067
Species: Dechloromonas aromatica (66.67%)
3 1965 bp 56.84 7.02 78.32
bjp_ig2103_scaffold_16608
Species: BJP_IG2103_Dechloromonas_60_92 (50%)
2 2216 bp 62.09 6.23 77.71
bjp_ig2103_scaffold_10875
Genus: Dechloromonas (75%)
4 3192 bp 56.33 5.78 77.63
bjp_ig2103_scaffold_18119
Species: BJP_IG2069_Desfulfarculales_53_13 (100%)
2 2055 bp 55.62 4.53 77.52
bjp_ig2103_scaffold_13906
Species: Dechloromonas aromatica (75%)
4 2584 bp 58.55 5.57 76.86
bjp_ig2103_scaffold_12049
Species: uncultured bacterium (66.67%)
3 2922 bp 54.69 6.16 76.28
bjp_ig2103_scaffold_9589
Species: BJP_IG2103_Dechloromonas_63_51 (100%)
1 3540 bp 56.10 6.19 76.10
bjp_ig2103_scaffold_12845
Species: Dechloromonas aromatica (50%)
4 2778 bp 57.81 5.08 75.59
bjp_ig2103_scaffold_12464
Species: Dechloromonas aromatica (66.67%)
3 2852 bp 53.12 4.47 74.68
Displaying items 401-450 of 467 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.